Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.84□□□□□ -1.63
GPC3P51654 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GPC3P51654 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.84□□□□□ -1.63
GPC3P51654 AL049870.4-201ENST00000555741 486 ntBASIC4.84□□□□□ -1.63
GPC3P51654 HMGB3P26-201ENST00000560051 582 ntBASIC4.84□□□□□ -1.63
GPC3P51654 AC021483.2-201ENST00000567415 758 ntBASIC4.84□□□□□ -1.63
GPC3P51654 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC3P51654 AC092653.1-201ENST00000608509 531 ntBASIC4.84□□□□□ -1.63
GPC3P51654 AL023881.1-201ENST00000621088 301 ntBASIC4.84□□□□□ -1.63
GPC3P51654 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC3P51654 AC010300.1-201ENST00000600671 5134 ntBASIC4.84□□□□□ -1.63
GPC3P51654 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
GPC3P51654 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.84□□□□□ -1.64
GPC3P51654 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
GPC3P51654 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
GPC3P51654 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
GPC3P51654 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC3P51654 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC3P51654 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC3P51654 AC091046.3-201ENST00000631455 1574 ntBASIC4.83□□□□□ -1.64
GPC3P51654 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC3P51654 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC3P51654 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC3P51654 RNA5SP479-201ENST00000364858 117 ntBASIC4.83□□□□□ -1.64
GPC3P51654 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC3P51654 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GPC3P51654 AC013404.1-201ENST00000413068 249 ntBASIC4.83□□□□□ -1.64
GPC3P51654 AC105402.1-201ENST00000413336 545 ntBASIC4.83□□□□□ -1.64
GPC3P51654 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.83□□□□□ -1.64
GPC3P51654 GTF2IP2-201ENST00000424290 697 ntBASIC4.83□□□□□ -1.64
GPC3P51654 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC3P51654 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC3P51654 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC3P51654 HMGB1P26-201ENST00000452520 628 ntBASIC4.83□□□□□ -1.64
GPC3P51654 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC3P51654 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC3P51654 MRPL49P2-201ENST00000521066 465 ntBASIC4.83□□□□□ -1.64
GPC3P51654 AP003730.1-201ENST00000524605 285 ntBASIC4.83□□□□□ -1.64
GPC3P51654 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GPC3P51654 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.83□□□□□ -1.64
GPC3P51654 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC3P51654 SLC25A36P1-201ENST00000590111 465 ntBASIC4.83□□□□□ -1.64
GPC3P51654 VN1R84P-201ENST00000593697 235 ntBASIC4.83□□□□□ -1.64
GPC3P51654 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GPC3P51654 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC3P51654 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC3P51654 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC3P51654 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC3P51654 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC3P51654 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC3P51654 AL158163.1-201ENST00000603915 1649 ntBASIC4.83□□□□□ -1.64
GPC3P51654 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC3P51654 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC3P51654 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC3P51654 AL592437.2-201ENST00000421655 2434 ntBASIC4.82□□□□□ -1.64
GPC3P51654 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.82□□□□□ -1.64
GPC3P51654 RNA5SP307-201ENST00000362863 116 ntBASIC4.82□□□□□ -1.64
GPC3P51654 RN7SKP227-201ENST00000364445 330 ntBASIC4.82□□□□□ -1.64
GPC3P51654 RNU4-31P-201ENST00000384211 141 ntBASIC4.82□□□□□ -1.64
GPC3P51654 SNORA70C-201ENST00000384538 135 ntBASIC4.82□□□□□ -1.64
GPC3P51654 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.82□□□□□ -1.64
GPC3P51654 AL121834.1-202ENST00000404494 277 ntBASIC4.82□□□□□ -1.64
GPC3P51654 RPL31P52-201ENST00000407532 367 ntBASIC4.82□□□□□ -1.64
GPC3P51654 SNORA74C-2-201ENST00000411179 201 ntBASIC4.82□□□□□ -1.64
GPC3P51654 RPS20P14-201ENST00000412545 360 ntBASIC4.82□□□□□ -1.64
GPC3P51654 NRBF2P2-201ENST00000413087 861 ntBASIC4.82□□□□□ -1.64
GPC3P51654 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC3P51654 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.82□□□□□ -1.64
GPC3P51654 GEMIN8P3-201ENST00000445417 720 ntBASIC4.82□□□□□ -1.64
GPC3P51654 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC3P51654 AC010683.1-201ENST00000473673 378 ntBASIC4.82□□□□□ -1.64
GPC3P51654 AC090543.1-201ENST00000492168 485 ntBASIC4.82□□□□□ -1.64
GPC3P51654 RN7SL691P-201ENST00000494487 301 ntBASIC4.82□□□□□ -1.64
GPC3P51654 AC108475.1-201ENST00000507880 950 ntBASIC4.82□□□□□ -1.64
GPC3P51654 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.82□□□□□ -1.64
GPC3P51654 AC108157.1-201ENST00000510511 539 ntBASIC4.82□□□□□ -1.64
GPC3P51654 AC093770.1-201ENST00000511559 571 ntBASIC4.82□□□□□ -1.64
GPC3P51654 SNORA31.9-201ENST00000516429 84 ntBASIC4.82□□□□□ -1.64
GPC3P51654 RNU6-1004P-201ENST00000516584 111 ntBASIC4.82□□□□□ -1.64
GPC3P51654 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.82□□□□□ -1.64
GPC3P51654 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC3P51654 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.82□□□□□ -1.64
GPC3P51654 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
GPC3P51654 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GPC3P51654 AL109766.1-201ENST00000555080 552 ntBASIC4.82□□□□□ -1.64
GPC3P51654 AC025884.1-201ENST00000556034 378 ntBASIC4.82□□□□□ -1.64
GPC3P51654 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC3P51654 MTATP6P25-201ENST00000574491 261 ntBASIC4.82□□□□□ -1.64
GPC3P51654 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
GPC3P51654 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.82□□□□□ -1.64
GPC3P51654 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC3P51654 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC3P51654 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC3P51654 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC3P51654 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.82□□□□□ -1.64
GPC3P51654 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.82□□□□□ -1.64
GPC3P51654 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GPC3P51654 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.82□□□□□ -1.64
GPC3P51654 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GPC3P51654 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms