Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF144AP50876 uc_338.11-201ENST00000619132 160 ntBASIC6.48□□□□□ -1.37
RNF144AP50876 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.48□□□□□ -1.37
RNF144AP50876 DDX10P2-201ENST00000417796 2614 ntBASIC6.48□□□□□ -1.37
RNF144AP50876 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.48□□□□□ -1.37
RNF144AP50876 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF144AP50876 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
RNF144AP50876 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF144AP50876 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF144AP50876 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.48□□□□□ -1.37
RNF144AP50876 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF144AP50876 DDX18P4-201ENST00000511690 1966 ntBASIC6.48□□□□□ -1.37
RNF144AP50876 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF144AP50876 MAPK10-261ENST00000641050 3109 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 USP9YP4-201ENST00000424401 1745 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF144AP50876 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RNF144AP50876 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF144AP50876 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.47□□□□□ -1.37
RNF144AP50876 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 AC102941.1-201ENST00000567616 1537 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 AL136531.3-201ENST00000624378 3658 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF144AP50876 RNA5SP172-201ENST00000365061 118 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 Y_RNA.364-201ENST00000365532 101 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF144AP50876 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.47□□□□□ -1.37
RNF144AP50876 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 AL590609.2-201ENST00000421430 368 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AL669831.1-202ENST00000428504 417 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF144AP50876 RPS20P5-201ENST00000434808 360 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 FABP5P14-201ENST00000437273 393 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC114755.1-201ENST00000453101 868 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF144AP50876 AP1S2P1-201ENST00000457344 379 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 PABPC1P3-201ENST00000469174 459 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF144AP50876 RN7SL776P-201ENST00000493390 268 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC023818.1-201ENST00000498379 384 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC106760.2-201ENST00000504159 619 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC109481.1-201ENST00000509173 282 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 OR7E161P-201ENST00000533722 967 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC023827.2-201ENST00000566880 1061 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF144AP50876 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF144AP50876 AC069061.3-201ENST00000582254 823 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.47□□□□□ -1.37
RNF144AP50876 AC100812.1-201ENST00000607622 580 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AL031777.2-201ENST00000611953 196 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF144AP50876 FAM157A-202ENST00000615155 405 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC007485.1-201ENST00000616755 206 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF144AP50876 AL121985.3-201ENST00000620690 523 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF144AP50876 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF144AP50876 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF144AP50876 U6.101-201ENST00000637707 76 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF144AP50876 MAPK10-357ENST00000641831 2858 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RNF144AP50876 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF144AP50876 CDY19P-201ENST00000411668 1613 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 CDY18P-201ENST00000438294 1609 ntBASIC6.47□□□□□ -1.37
RNF144AP50876 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
RNF144AP50876 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF144AP50876 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF144AP50876 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.46□□□□□ -1.37
RNF144AP50876 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF144AP50876 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RNF144AP50876 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF144AP50876 MAPK10-344ENST00000641718 3746 ntBASIC6.46□□□□□ -1.37
RNF144AP50876 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RNF144AP50876 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.46□□□□□ -1.37
RNF144AP50876 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 Y_RNA.307-201ENST00000365022 117 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 Y_RNA.489-201ENST00000384410 101 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 RPS3AP5-201ENST00000389400 821 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 RN7SKP30-201ENST00000411373 334 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 MTATP6P29-201ENST00000415057 132 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RNF144AP50876 AL672212.1-201ENST00000422246 400 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 ELOBP4-201ENST00000423418 296 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms