Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDX1P47902 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CDX1P47902 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDX1P47902 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CDX1P47902 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
CDX1P47902 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.09□□□□□ -1.76
CDX1P47902 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDX1P47902 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 AC068254.2-201ENST00000623938 3577 ntBASIC4.08□□□□□ -1.76
CDX1P47902 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDX1P47902 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
CDX1P47902 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
CDX1P47902 RNA5SP305-201ENST00000362665 119 ntBASIC4.08□□□□□ -1.76
CDX1P47902 OR1L1-202ENST00000373686 1083 ntBASIC4.08□□□□□ -1.76
CDX1P47902 RNA5SP372-201ENST00000390836 115 ntBASIC4.08□□□□□ -1.76
CDX1P47902 AP000580.1-201ENST00000404439 358 ntBASIC4.08□□□□□ -1.76
CDX1P47902 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDX1P47902 RN7SKP126-201ENST00000411143 300 ntBASIC4.08□□□□□ -1.76
CDX1P47902 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.08□□□□□ -1.76
CDX1P47902 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 AC124944.2-201ENST00000429866 1242 ntBASIC4.08□□□□□ -1.76
CDX1P47902 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.08□□□□□ -1.76
CDX1P47902 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.08□□□□□ -1.76
CDX1P47902 AC244505.3-201ENST00000454598 187 ntBASIC4.08□□□□□ -1.76
CDX1P47902 RN7SL329P-201ENST00000467740 299 ntBASIC4.08□□□□□ -1.76
CDX1P47902 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.08□□□□□ -1.76
CDX1P47902 RN7SL817P-201ENST00000480777 288 ntBASIC4.08□□□□□ -1.76
CDX1P47902 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CDX1P47902 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.08□□□□□ -1.76
CDX1P47902 AC118282.2-201ENST00000508739 374 ntBASIC4.08□□□□□ -1.76
CDX1P47902 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.08□□□□□ -1.76
CDX1P47902 RNU6-276P-201ENST00000516114 96 ntBASIC4.08□□□□□ -1.76
CDX1P47902 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.08□□□□□ -1.76
CDX1P47902 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 HIGD1AP6-201ENST00000521833 279 ntBASIC4.08□□□□□ -1.76
CDX1P47902 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.08□□□□□ -1.76
CDX1P47902 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.08□□□□□ -1.76
CDX1P47902 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDX1P47902 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.08□□□□□ -1.76
CDX1P47902 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.08□□□□□ -1.76
CDX1P47902 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.08□□□□□ -1.76
CDX1P47902 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.08□□□□□ -1.76
CDX1P47902 AC090330.1-201ENST00000588646 764 ntBASIC4.08□□□□□ -1.76
CDX1P47902 AC006116.3-201ENST00000592968 361 ntBASIC4.08□□□□□ -1.76
CDX1P47902 AC008687.2-201ENST00000597865 520 ntBASIC4.08□□□□□ -1.76
CDX1P47902 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.08□□□□□ -1.76
CDX1P47902 AL606834.3-201ENST00000602615 496 ntBASIC4.08□□□□□ -1.76
CDX1P47902 SGO1P1-201ENST00000603525 1447 ntBASIC4.08□□□□□ -1.76
CDX1P47902 AL162431.4-201ENST00000604674 411 ntBASIC4.08□□□□□ -1.76
CDX1P47902 AC091979.2-201ENST00000607514 214 ntBASIC4.08□□□□□ -1.76
CDX1P47902 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 AC068870.2-201ENST00000620635 389 ntBASIC4.08□□□□□ -1.76
CDX1P47902 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 AP006248.2-201ENST00000623309 592 ntBASIC4.08□□□□□ -1.76
CDX1P47902 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDX1P47902 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.08□□□□□ -1.76
CDX1P47902 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDX1P47902 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDX1P47902 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.07□□□□□ -1.76
CDX1P47902 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 AC138393.1-206ENST00000540997 1886 ntBASIC4.07□□□□□ -1.76
CDX1P47902 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CDX1P47902 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.07□□□□□ -1.76
CDX1P47902 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDX1P47902 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDX1P47902 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CDX1P47902 MTND4P8-201ENST00000514997 1362 ntBASIC4.07□□□□□ -1.76
CDX1P47902 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDX1P47902 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.07□□□□□ -1.76
CDX1P47902 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.07□□□□□ -1.76
CDX1P47902 RNU6-1151P-201ENST00000384684 107 ntBASIC4.07□□□□□ -1.76
CDX1P47902 MIR16-1-201ENST00000385271 89 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AL645927.1-201ENST00000396783 406 ntBASIC4.07□□□□□ -1.76
CDX1P47902 MTCO2P31-201ENST00000402702 684 ntBASIC4.07□□□□□ -1.76
CDX1P47902 GSTA8P-201ENST00000404253 637 ntBASIC4.07□□□□□ -1.76
CDX1P47902 HDGFP1-201ENST00000405943 252 ntBASIC4.07□□□□□ -1.76
CDX1P47902 OR51A3P-201ENST00000413596 924 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC016769.2-201ENST00000414815 475 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.07□□□□□ -1.76
CDX1P47902 FABP7P1-201ENST00000424004 391 ntBASIC4.07□□□□□ -1.76
CDX1P47902 AC092634.2-201ENST00000428146 1010 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms