Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HADHAP40939 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
HADHAP40939 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HADHAP40939 ASNSP1-204ENST00000641977 1664 ntBASIC4.87□□□□□ -1.63
HADHAP40939 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HADHAP40939 AC119744.1-201ENST00000454746 1715 ntBASIC4.87□□□□□ -1.63
HADHAP40939 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HADHAP40939 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HADHAP40939 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HADHAP40939 MIR620-201ENST00000385232 95 ntBASIC4.87□□□□□ -1.63
HADHAP40939 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HADHAP40939 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HADHAP40939 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HADHAP40939 AL357515.1-201ENST00000402967 542 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.87□□□□□ -1.63
HADHAP40939 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.87□□□□□ -1.63
HADHAP40939 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.87□□□□□ -1.63
HADHAP40939 AL138785.1-201ENST00000425821 331 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.87□□□□□ -1.63
HADHAP40939 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.87□□□□□ -1.63
HADHAP40939 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.87□□□□□ -1.63
HADHAP40939 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.87□□□□□ -1.63
HADHAP40939 AC000041.1-201ENST00000439655 175 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AL592437.1-201ENST00000443781 492 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AC112498.1-201ENST00000444401 332 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.87□□□□□ -1.63
HADHAP40939 TRY2P-201ENST00000448860 689 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AC008280.2-201ENST00000455473 307 ntBASIC4.87□□□□□ -1.63
HADHAP40939 BX248409.1-201ENST00000455497 255 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AC108751.2-201ENST00000469993 231 ntBASIC4.87□□□□□ -1.63
HADHAP40939 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.87□□□□□ -1.63
HADHAP40939 AC008427.1-201ENST00000503102 655 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AC093801.2-201ENST00000503966 1050 ntBASIC4.87□□□□□ -1.63
HADHAP40939 GAPDHP56-201ENST00000506031 988 ntBASIC4.87□□□□□ -1.63
HADHAP40939 MRPS33P2-201ENST00000507850 322 ntBASIC4.87□□□□□ -1.63
HADHAP40939 PRELID3BP4-201ENST00000515476 571 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.87□□□□□ -1.63
HADHAP40939 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.87□□□□□ -1.63
HADHAP40939 AC090819.1-201ENST00000523800 1111 ntBASIC4.87□□□□□ -1.63
HADHAP40939 OR5AZ1P-201ENST00000527448 943 ntBASIC4.87□□□□□ -1.63
HADHAP40939 BRD9P1-201ENST00000529855 560 ntBASIC4.87□□□□□ -1.63
HADHAP40939 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.87□□□□□ -1.63
HADHAP40939 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.87□□□□□ -1.63
HADHAP40939 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HADHAP40939 AC144521.1-201ENST00000607148 956 ntBASIC4.87□□□□□ -1.63
HADHAP40939 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.87□□□□□ -1.63
HADHAP40939 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HADHAP40939 AL627171.1-201ENST00000618845 1308 ntBASIC4.87□□□□□ -1.63
HADHAP40939 AL031119.1-201ENST00000404707 1879 ntBASIC4.87□□□□□ -1.63
HADHAP40939 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.87□□□□□ -1.63
HADHAP40939 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.87□□□□□ -1.63
HADHAP40939 AC007529.1-201ENST00000418574 2178 ntBASIC4.87□□□□□ -1.63
HADHAP40939 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HADHAP40939 LINC01355-201ENST00000566551 5444 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AL139811.1-201ENST00000424779 2299 ntBASIC4.86□□□□□ -1.63
HADHAP40939 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HADHAP40939 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HADHAP40939 RNA5SP443-201ENST00000363083 132 ntBASIC4.86□□□□□ -1.63
HADHAP40939 RNU6-984P-201ENST00000363236 109 ntBASIC4.86□□□□□ -1.63
HADHAP40939 RNU6-549P-201ENST00000384433 107 ntBASIC4.86□□□□□ -1.63
HADHAP40939 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.86□□□□□ -1.63
HADHAP40939 AC114755.2-201ENST00000413520 361 ntBASIC4.86□□□□□ -1.63
HADHAP40939 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.86□□□□□ -1.63
HADHAP40939 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.86□□□□□ -1.63
HADHAP40939 AC011242.1-201ENST00000433596 1158 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AC093414.1-201ENST00000434712 514 ntBASIC4.86□□□□□ -1.63
HADHAP40939 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.86□□□□□ -1.63
HADHAP40939 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.86□□□□□ -1.63
HADHAP40939 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.86□□□□□ -1.63
HADHAP40939 RPL7P31-201ENST00000450192 724 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.86□□□□□ -1.63
HADHAP40939 RPL35AP28-201ENST00000459730 331 ntBASIC4.86□□□□□ -1.63
HADHAP40939 RN7SL558P-201ENST00000497468 299 ntBASIC4.86□□□□□ -1.63
HADHAP40939 RNA5SP360-201ENST00000516555 118 ntBASIC4.86□□□□□ -1.63
HADHAP40939 RNU6-709P-201ENST00000517257 104 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.86□□□□□ -1.63
HADHAP40939 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.86□□□□□ -1.63
HADHAP40939 OR4A2P-201ENST00000527276 913 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.86□□□□□ -1.63
HADHAP40939 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.86□□□□□ -1.63
HADHAP40939 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.86□□□□□ -1.63
HADHAP40939 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HADHAP40939 VN1R87P-201ENST00000596706 487 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AC020910.3-201ENST00000603701 874 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AL121932.1-201ENST00000605542 214 ntBASIC4.86□□□□□ -1.63
HADHAP40939 OR7A19P-201ENST00000608051 733 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AF129408.1-201ENST00000608767 431 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AC018926.3-201ENST00000618841 406 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AP006248.2-201ENST00000623309 592 ntBASIC4.86□□□□□ -1.63
HADHAP40939 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.86□□□□□ -1.63
HADHAP40939 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HADHAP40939 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HADHAP40939 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HADHAP40939 AC126323.6-202ENST00000568092 3511 ntBASIC4.86□□□□□ -1.63
HADHAP40939 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HADHAP40939 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HADHAP40939 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
HADHAP40939 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HADHAP40939 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.85□□□□□ -1.63
HADHAP40939 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms