Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LMNB1P20700 EPS15P1-201ENST00000448836 336 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AC239798.3-201ENST00000454459 408 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.73□□□□□ -1.33
LMNB1P20700 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.73□□□□□ -1.33
LMNB1P20700 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.73□□□□□ -1.33
LMNB1P20700 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.73□□□□□ -1.33
LMNB1P20700 AC068587.1-201ENST00000483613 781 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 MTAPP1-201ENST00000489154 819 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 DUTP1-201ENST00000493631 470 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.73□□□□□ -1.33
LMNB1P20700 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.73□□□□□ -1.33
LMNB1P20700 ATP1B1P1-201ENST00000509767 915 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.73□□□□□ -1.33
LMNB1P20700 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.73□□□□□ -1.33
LMNB1P20700 AP002812.4-201ENST00000532139 286 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMNB1P20700 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.73□□□□□ -1.33
LMNB1P20700 AC136619.2-201ENST00000563361 631 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AC068135.2-201ENST00000569293 1028 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
LMNB1P20700 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.73□□□□□ -1.33
LMNB1P20700 MIR132-201ENST00000591554 101 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.73□□□□□ -1.33
LMNB1P20700 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.73□□□□□ -1.33
LMNB1P20700 AC091805.2-201ENST00000603848 235 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 NDUFA8P1-201ENST00000605525 367 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AC069234.5-201ENST00000611056 416 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AC009704.2-201ENST00000618739 483 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AL356266.1-201ENST00000623311 483 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 AC091905.4-201ENST00000623432 202 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.73□□□□□ -1.33
LMNB1P20700 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.73□□□□□ -1.33
LMNB1P20700 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.73□□□□□ -1.33
LMNB1P20700 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LMNB1P20700 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMNB1P20700 AC245100.2-201ENST00000454544 1679 ntBASIC6.73□□□□□ -1.33
LMNB1P20700 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMNB1P20700 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.73□□□□□ -1.33
LMNB1P20700 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMNB1P20700 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
LMNB1P20700 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMNB1P20700 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMNB1P20700 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LMNB1P20700 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
LMNB1P20700 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
LMNB1P20700 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LMNB1P20700 AC092447.7-201ENST00000422212 1621 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LMNB1P20700 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.72□□□□□ -1.33
LMNB1P20700 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.72□□□□□ -1.33
LMNB1P20700 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LMNB1P20700 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LMNB1P20700 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
LMNB1P20700 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LMNB1P20700 RNU6-666P-201ENST00000363499 107 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LMNB1P20700 RNY3P14-201ENST00000384309 102 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 SNORA16A-201ENST00000384342 137 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 SNORA11C-201ENST00000408532 129 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 MIR548F1-201ENST00000408667 84 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LMNB1P20700 GAPDHP49-201ENST00000421421 961 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.72□□□□□ -1.33
LMNB1P20700 AL009174.1-201ENST00000426577 416 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.72□□□□□ -1.33
LMNB1P20700 AL139415.2-201ENST00000431968 163 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.72□□□□□ -1.33
LMNB1P20700 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.72□□□□□ -1.33
LMNB1P20700 snoU13.20-201ENST00000459180 104 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.72□□□□□ -1.33
LMNB1P20700 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LMNB1P20700 AC008549.1-201ENST00000512900 643 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 RNU6-1178P-201ENST00000516674 107 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 AP001207.1-201ENST00000524051 481 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.72□□□□□ -1.33
LMNB1P20700 AC074029.1-201ENST00000552531 1044 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.72□□□□□ -1.33
LMNB1P20700 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LMNB1P20700 MIR7844-201ENST00000616161 122 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LMNB1P20700 AC099494.2-201ENST00000623371 978 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.72□□□□□ -1.33
LMNB1P20700 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.72□□□□□ -1.33
LMNB1P20700 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.72□□□□□ -1.33
LMNB1P20700 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LMNB1P20700 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
LMNB1P20700 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LMNB1P20700 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.71□□□□□ -1.33
LMNB1P20700 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LMNB1P20700 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LMNB1P20700 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LMNB1P20700 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LMNB1P20700 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LMNB1P20700 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LMNB1P20700 AC068870.3-201ENST00000625077 2536 ntBASIC6.71□□□□□ -1.34
LMNB1P20700 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
LMNB1P20700 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LMNB1P20700 HMGB1P5-201ENST00000255320 642 ntBASIC6.71□□□□□ -1.34
LMNB1P20700 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms