Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.56□□□□□ -1.68
MSH3P20585 AC008173.1-201ENST00000418901 264 ntBASIC4.56□□□□□ -1.68
MSH3P20585 PTP4A1P7-201ENST00000423476 514 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.56□□□□□ -1.68
MSH3P20585 MTND2P2-201ENST00000434633 945 ntBASIC4.56□□□□□ -1.68
MSH3P20585 RRM2P4-201ENST00000441721 562 ntBASIC4.56□□□□□ -1.68
MSH3P20585 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.56□□□□□ -1.68
MSH3P20585 AC069540.1-201ENST00000446320 988 ntBASIC4.56□□□□□ -1.68
MSH3P20585 CYCSP42-201ENST00000450823 238 ntBASIC4.56□□□□□ -1.68
MSH3P20585 CEACAMP6-201ENST00000452007 574 ntBASIC4.56□□□□□ -1.68
MSH3P20585 SCARNA10-201ENST00000459255 330 ntBASIC4.56□□□□□ -1.68
MSH3P20585 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MSH3P20585 AC104164.3-201ENST00000467363 1258 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC007686.1-201ENST00000488511 463 ntBASIC4.56□□□□□ -1.68
MSH3P20585 DEFB109F-201ENST00000491870 277 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC108022.1-201ENST00000493466 478 ntBASIC4.56□□□□□ -1.68
MSH3P20585 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH3P20585 UBE2V1P12-201ENST00000503954 474 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC118282.1-201ENST00000506408 765 ntBASIC4.56□□□□□ -1.68
MSH3P20585 SUMO2P5-201ENST00000506790 245 ntBASIC4.56□□□□□ -1.68
MSH3P20585 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
MSH3P20585 AC021146.3-201ENST00000511911 260 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.56□□□□□ -1.68
MSH3P20585 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.56□□□□□ -1.68
MSH3P20585 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.56□□□□□ -1.68
MSH3P20585 MTND2P32-201ENST00000521584 1038 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC118942.1-201ENST00000529674 1035 ntBASIC4.56□□□□□ -1.68
MSH3P20585 CYCSP28-201ENST00000534284 321 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.56□□□□□ -1.68
MSH3P20585 AL049838.1-201ENST00000563647 981 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC015912.2-201ENST00000571053 181 ntBASIC4.56□□□□□ -1.68
MSH3P20585 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.56□□□□□ -1.68
MSH3P20585 RN7SL690P-201ENST00000582087 240 ntBASIC4.56□□□□□ -1.68
MSH3P20585 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH3P20585 AC006116.5-201ENST00000591936 559 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC063944.3-201ENST00000609969 533 ntBASIC4.56□□□□□ -1.68
MSH3P20585 RMST_10.1-201ENST00000616309 154 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC006927.2-201ENST00000639256 389 ntBASIC4.56□□□□□ -1.68
MSH3P20585 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
MSH3P20585 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH3P20585 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH3P20585 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH3P20585 AC012618.3-205ENST00000637896 1496 ntBASIC4.56□□□□□ -1.68
MSH3P20585 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
MSH3P20585 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
MSH3P20585 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.55□□□□□ -1.68
MSH3P20585 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MSH3P20585 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
MSH3P20585 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSH3P20585 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSH3P20585 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSH3P20585 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSH3P20585 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.55□□□□□ -1.68
MSH3P20585 RNU5E-10P-201ENST00000363506 118 ntBASIC4.55□□□□□ -1.68
MSH3P20585 RNVU1-6-201ENST00000364688 164 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AC234772.1-201ENST00000377927 937 ntBASIC4.55□□□□□ -1.68
MSH3P20585 RNA5SP397-201ENST00000391323 118 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AL512430.2-201ENST00000406786 339 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AC010385.1-201ENST00000412374 256 ntBASIC4.55□□□□□ -1.68
MSH3P20585 RPL21P108-201ENST00000413857 481 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AC073136.2-201ENST00000417282 849 ntBASIC4.55□□□□□ -1.68
MSH3P20585 CYCSP10-201ENST00000417973 294 ntBASIC4.55□□□□□ -1.68
MSH3P20585 Z74021.1-201ENST00000423610 407 ntBASIC4.55□□□□□ -1.68
MSH3P20585 MTCO2P23-201ENST00000425216 680 ntBASIC4.55□□□□□ -1.68
MSH3P20585 CACYBPP1-201ENST00000438592 684 ntBASIC4.55□□□□□ -1.68
MSH3P20585 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH3P20585 AL162591.2-201ENST00000449634 317 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AL935212.3-201ENST00000450729 284 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AC022431.1-201ENST00000450941 438 ntBASIC4.55□□□□□ -1.68
MSH3P20585 OFD1P3Y-201ENST00000453312 783 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AL513533.1-201ENST00000453728 415 ntBASIC4.55□□□□□ -1.68
MSH3P20585 ISCUP1-201ENST00000454451 448 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AC005008.1-201ENST00000456151 612 ntBASIC4.55□□□□□ -1.68
MSH3P20585 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.55□□□□□ -1.68
MSH3P20585 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.55□□□□□ -1.68
MSH3P20585 RPL23AP72-201ENST00000492447 435 ntBASIC4.55□□□□□ -1.68
MSH3P20585 TPT1P3-201ENST00000492841 512 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.55□□□□□ -1.68
MSH3P20585 AC008427.1-201ENST00000503102 655 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AC010374.1-201ENST00000503762 1237 ntBASIC4.55□□□□□ -1.68
MSH3P20585 CDH12P2-201ENST00000504393 298 ntBASIC4.55□□□□□ -1.68
MSH3P20585 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MSH3P20585 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH3P20585 RN7SKP141-201ENST00000516167 338 ntBASIC4.55□□□□□ -1.68
MSH3P20585 RNU6-1308P-201ENST00000516817 103 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AC134698.5-201ENST00000519444 336 ntBASIC4.55□□□□□ -1.68
MSH3P20585 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.55□□□□□ -1.68
MSH3P20585 AC010376.1-201ENST00000522101 334 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH3P20585 OR7E13P-201ENST00000526052 910 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.55□□□□□ -1.68
MSH3P20585 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.55□□□□□ -1.68
MSH3P20585 NPM1P35-201ENST00000533043 868 ntBASIC4.55□□□□□ -1.68
MSH3P20585 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.55□□□□□ -1.68
MSH3P20585 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.55□□□□□ -1.68
MSH3P20585 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.55□□□□□ -1.68
MSH3P20585 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.55□□□□□ -1.68
MSH3P20585 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.55□□□□□ -1.68
MSH3P20585 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.55□□□□□ -1.68
MSH3P20585 AC012557.1-201ENST00000607115 611 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms