Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC004453.1-201ENST00000487895 408 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC113347.3-201ENST00000509113 148 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 SNORA3.4-201ENST00000515969 96 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC008033.2-201ENST00000542626 177 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 BNIP3P1-201ENST00000547295 580 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC122134.1-201ENST00000565664 1104 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC022884.3-201ENST00000579571 248 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 VN1R83P-201ENST00000595685 445 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 MTND3P19-201ENST00000603825 345 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AL583856.2-201ENST00000606298 543 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC007497.1-201ENST00000610421 561 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC112694.2-201ENST00000623697 768 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 DDX18P4-201ENST00000511690 1966 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC138393.1-206ENST00000540997 1886 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DOBP13765 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 INTS6P1-201ENST00000504674 2530 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 SALL4P2-201ENST00000423288 2910 ntBASIC4.32□□□□□ -1.72
HLA-DOBP13765 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DOBP13765 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DOBP13765 CASC19-206ENST00000641028 1430 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 OR4K6P-201ENST00000416478 897 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AL645608.4-201ENST00000423619 154 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AP001324.1-201ENST00000428553 399 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 FTLP19-201ENST00000433300 394 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 PRPF38AP2-201ENST00000438179 851 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 PTMAP6-201ENST00000439110 327 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC009263.1-201ENST00000441193 1239 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AL929288.2-201ENST00000446368 407 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC010733.1-201ENST00000451515 401 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC234781.3-201ENST00000452540 973 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DOBP13765 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC093890.1-201ENST00000502554 540 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC008638.1-201ENST00000506035 866 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC105313.1-201ENST00000509121 353 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC118465.1-201ENST00000513820 1271 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 ZNF321P-202ENST00000550843 495 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC015688.2-201ENST00000584523 262 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AP001269.3-201ENST00000588718 329 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC114878.2-201ENST00000604863 1251 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 BNIP3P4-201ENST00000604946 565 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AL121932.1-201ENST00000605542 214 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC139769.3-201ENST00000618383 175 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC015804.1-201ENST00000622935 435 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AP003497.2-201ENST00000624220 967 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 ZNF663P-202ENST00000641770 1131 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC025574.1-201ENST00000554784 1653 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DOBP13765 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DOBP13765 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DOBP13765 SOCS5P3-201ENST00000425115 1576 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 AC012321.1-201ENST00000561622 1588 ntBASIC4.31□□□□□ -1.72
HLA-DOBP13765 SAMMSON-226ENST00000642089 1582 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms