Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 RN7SKP114-201ENST00000410327 279 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC010385.1-201ENST00000412374 256 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC093162.1-201ENST00000419682 124 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 PNRC2P1-201ENST00000423940 420 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.4□□□□□ -1.71
CLPTM1O96005 BX323845.1-201ENST00000432417 179 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.4□□□□□ -1.71
CLPTM1O96005 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.4□□□□□ -1.71
CLPTM1O96005 AC092013.1-201ENST00000438795 332 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC044797.1-201ENST00000445744 679 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC073850.1-201ENST00000449243 255 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 SCARNA10-201ENST00000459255 330 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.4□□□□□ -1.71
CLPTM1O96005 AC097484.1-201ENST00000471148 389 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 RPL7AP6-201ENST00000477943 801 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.4□□□□□ -1.71
CLPTM1O96005 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 AC109462.1-201ENST00000491087 368 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC008897.1-201ENST00000494006 347 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 CDH12P2-201ENST00000504393 298 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.4□□□□□ -1.71
CLPTM1O96005 RNA5SP446-201ENST00000515955 82 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.4□□□□□ -1.71
CLPTM1O96005 HIGD1AP18-201ENST00000520730 278 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 MTND2P32-201ENST00000521584 1038 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 IFITM8P-201ENST00000522529 394 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC090281.1-201ENST00000523019 276 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC118942.1-201ENST00000529674 1035 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC092490.3-201ENST00000545370 572 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 AC087888.1-201ENST00000550884 1254 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC106734.1-201ENST00000568646 663 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 AC124283.4-201ENST00000581815 456 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC007448.1-201ENST00000582714 234 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC011447.4-201ENST00000587562 111 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC087763.1-201ENST00000603391 286 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 MIR4727-201ENST00000622232 55 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.4□□□□□ -1.71
CLPTM1O96005 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.4□□□□□ -1.71
CLPTM1O96005 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CLPTM1O96005 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 AL356489.2-201ENST00000566968 3528 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 AC007342.7-201ENST00000624610 2337 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
CLPTM1O96005 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 OR11H5P-202ENST00000641612 1325 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.39□□□□□ -1.71
CLPTM1O96005 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.39□□□□□ -1.71
CLPTM1O96005 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.39□□□□□ -1.71
CLPTM1O96005 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.39□□□□□ -1.71
CLPTM1O96005 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 AC067945.1-201ENST00000342609 618 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 RNA5SP455-201ENST00000365190 119 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CLPTM1O96005 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 AL021331.1-201ENST00000402817 582 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 RNU4-74P-201ENST00000411280 161 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.39□□□□□ -1.71
CLPTM1O96005 PTP4A1P7-201ENST00000423476 514 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 MTATP6P17-201ENST00000431030 672 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 RPS7P2-201ENST00000435134 607 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 HLA-N-201ENST00000437516 135 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 FABP5P3-201ENST00000437960 408 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.39□□□□□ -1.71
CLPTM1O96005 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.39□□□□□ -1.71
CLPTM1O96005 AC092647.3-201ENST00000443044 633 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.39□□□□□ -1.71
CLPTM1O96005 RPS27AP15-201ENST00000447672 466 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 AL009048.1-201ENST00000450437 298 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 RPS17P11-201ENST00000474297 293 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.39□□□□□ -1.71
CLPTM1O96005 HMGN2P25-201ENST00000486956 268 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 AC004453.1-201ENST00000487895 408 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLPTM1O96005 AC004980.4-201ENST00000513375 203 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 SNORA19.3-201ENST00000516165 130 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 RN7SKP147-201ENST00000517154 244 ntBASIC4.39□□□□□ -1.71
CLPTM1O96005 RNU6-709P-201ENST00000517257 104 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms