Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC108043.1-201ENST00000512696 574 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.14□□□□□ -1.59
PROM1O43490 RNU2-30P-201ENST00000516209 141 ntBASIC5.14□□□□□ -1.59
PROM1O43490 RNA5SP228-201ENST00000516232 133 ntBASIC5.14□□□□□ -1.59
PROM1O43490 RNU6-1004P-201ENST00000516584 111 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 YWHABP2-201ENST00000540201 713 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC092747.2-201ENST00000545069 983 ntBASIC5.14□□□□□ -1.59
PROM1O43490 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.14□□□□□ -1.59
PROM1O43490 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.14□□□□□ -1.59
PROM1O43490 AL390726.5-202ENST00000564800 256 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 AP000769.2-201ENST00000602344 396 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC107304.1-201ENST00000604229 296 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC037198.3-201ENST00000616754 526 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC092656.1-203ENST00000624134 423 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.14□□□□□ -1.59
PROM1O43490 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.14□□□□□ -1.59
PROM1O43490 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.14□□□□□ -1.59
PROM1O43490 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.14□□□□□ -1.59
PROM1O43490 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.14□□□□□ -1.59
PROM1O43490 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PROM1O43490 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.13□□□□□ -1.59
PROM1O43490 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 RNA5SP234-201ENST00000363916 119 ntBASIC5.13□□□□□ -1.59
PROM1O43490 RNU6-707P-201ENST00000364647 95 ntBASIC5.13□□□□□ -1.59
PROM1O43490 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 RNU6-1200P-201ENST00000384162 107 ntBASIC5.13□□□□□ -1.59
PROM1O43490 OR8V1P-201ENST00000395193 873 ntBASIC5.13□□□□□ -1.59
PROM1O43490 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.13□□□□□ -1.59
PROM1O43490 RNU2-50P-201ENST00000410494 143 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.13□□□□□ -1.59
PROM1O43490 AF274854.1-201ENST00000413236 615 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.13□□□□□ -1.59
PROM1O43490 SRSF1P1-201ENST00000424058 520 ntBASIC5.13□□□□□ -1.59
PROM1O43490 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.13□□□□□ -1.59
PROM1O43490 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
PROM1O43490 FAM96AP1-201ENST00000430879 482 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.13□□□□□ -1.59
PROM1O43490 AL672138.1-201ENST00000450604 1015 ntBASIC5.13□□□□□ -1.59
PROM1O43490 TPMTP4-201ENST00000450749 678 ntBASIC5.13□□□□□ -1.59
PROM1O43490 RN7SL51P-201ENST00000468230 285 ntBASIC5.13□□□□□ -1.59
PROM1O43490 RPL7P18-201ENST00000478965 734 ntBASIC5.13□□□□□ -1.59
PROM1O43490 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.13□□□□□ -1.59
PROM1O43490 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.13□□□□□ -1.59
PROM1O43490 AC104090.1-201ENST00000506341 1171 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.13□□□□□ -1.59
PROM1O43490 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.13□□□□□ -1.59
PROM1O43490 MTCO2P32-201ENST00000514865 403 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.13□□□□□ -1.59
PROM1O43490 RNU6-513P-201ENST00000516104 104 ntBASIC5.13□□□□□ -1.59
PROM1O43490 SCARNA16.4-201ENST00000516956 187 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.13□□□□□ -1.59
PROM1O43490 OR8G3P-201ENST00000533406 921 ntBASIC5.13□□□□□ -1.59
PROM1O43490 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.13□□□□□ -1.59
PROM1O43490 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.13□□□□□ -1.59
PROM1O43490 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.13□□□□□ -1.59
PROM1O43490 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.13□□□□□ -1.59
PROM1O43490 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.13□□□□□ -1.59
PROM1O43490 NIFKP8-201ENST00000560500 874 ntBASIC5.13□□□□□ -1.59
PROM1O43490 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 AGGF1P4-201ENST00000568249 801 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.13□□□□□ -1.59
PROM1O43490 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.13□□□□□ -1.59
PROM1O43490 AC010632.3-201ENST00000611377 369 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.13□□□□□ -1.59
PROM1O43490 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.13□□□□□ -1.59
PROM1O43490 AC090582.1-201ENST00000636321 199 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AC119674.1-212ENST00000641155 993 ntBASIC5.13□□□□□ -1.59
PROM1O43490 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 AC235565.1-201ENST00000456962 1325 ntBASIC5.13□□□□□ -1.59
PROM1O43490 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PROM1O43490 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 AL356473.1-201ENST00000406203 1408 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AC092104.1-201ENST00000497346 1441 ntBASIC5.13□□□□□ -1.59
PROM1O43490 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.13□□□□□ -1.59
PROM1O43490 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.13□□□□□ -1.59
PROM1O43490 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PROM1O43490 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PROM1O43490 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.12□□□□□ -1.59
PROM1O43490 AL355852.1-201ENST00000454081 1771 ntBASIC5.12□□□□□ -1.59
PROM1O43490 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PROM1O43490 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms