Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MIR4646-201ENST00000580775 63 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 PRPF19P1-201ENST00000584766 898 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH17O14917 AL390838.2-201ENST00000602394 274 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 AL390816.3-201ENST00000604527 1066 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 AC010200.2-201ENST00000605098 235 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDH17O14917 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH17O14917 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH17O14917 AL049539.1-201ENST00000611964 459 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH17O14917 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDH17O14917 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH17O14917 AP002505.2-201ENST00000623585 696 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 AP003400.3-201ENST00000624904 346 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 AC135068.12-201ENST00000637370 931 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH17O14917 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
PCDH17O14917 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PCDH17O14917 AC131971.1-201ENST00000332881 1482 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 HSPA8P18-201ENST00000439846 1928 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDH17O14917 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PCDH17O14917 AC023421.1-201ENST00000590535 1785 ntBASIC4.99□□□□□ -1.61
PCDH17O14917 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH17O14917 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDH17O14917 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDH17O14917 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 AC011493.1-201ENST00000596753 1632 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PCDH17O14917 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PCDH17O14917 SNORD65.1-201ENST00000390889 71 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 U3.36-201ENST00000408418 213 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDH17O14917 MRPS36P1-201ENST00000421291 307 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH17O14917 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 TMX2P1-201ENST00000436507 708 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AL008629.1-201ENST00000438615 184 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AL772161.1-201ENST00000439130 476 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 MTCO2P25-201ENST00000447065 681 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 AL035090.1-201ENST00000454835 332 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 RPL21P71-201ENST00000465598 459 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 RPS18P6-201ENST00000476880 458 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AL049874.2-201ENST00000492636 288 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 MYL12BP2-201ENST00000503948 512 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDH17O14917 AC012400.1-201ENST00000518452 381 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 OR4A2P-201ENST00000527276 913 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AP000676.2-201ENST00000529711 301 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH17O14917 AP004607.2-201ENST00000533949 322 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH17O14917 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 ZNF321P-202ENST00000550843 495 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDH17O14917 AC040958.1-201ENST00000561102 201 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AL390726.5-202ENST00000564800 256 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDH17O14917 BNIP3P26-201ENST00000600827 554 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 AC009597.2-201ENST00000604659 592 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AP003392.5-201ENST00000607857 415 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 MIR6748-201ENST00000610433 71 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AC116447.1-201ENST00000613153 453 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AC048344.4-201ENST00000619744 527 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH17O14917 PHKBP1-201ENST00000450951 1951 ntBASIC4.98□□□□□ -1.61
PCDH17O14917 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PCDH17O14917 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH17O14917 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH17O14917 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
PCDH17O14917 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH17O14917 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH17O14917 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms