Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RNU6-444P-201ENST00000383988 108 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 SNORA70-201ENST00000384436 135 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 FABP12P1-201ENST00000401911 322 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 MTCO3P31-201ENST00000405526 789 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 HNRNPDP2-201ENST00000406475 478 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC002524.1-201ENST00000411687 547 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 DPPA2P3-201ENST00000411853 655 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC008280.1-201ENST00000418851 412 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC00993-201ENST00000420453 540 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AL031736.2-201ENST00000426573 787 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 GAPDHP58-201ENST00000438477 1006 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC092473.1-201ENST00000441098 221 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AL450023.1-201ENST00000450868 751 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC002553.2-201ENST00000453217 340 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 PPIAP21-201ENST00000464473 501 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 RPS7P6-201ENST00000485777 579 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 NCOR1P1-202ENST00000486162 291 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 SNORA48.10-201ENST00000516965 160 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 TRAV15-201ENST00000556680 249 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC090515.3-201ENST00000560431 315 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC044860.2-201ENST00000561005 179 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC074051.3-201ENST00000570238 358 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC006272.2-201ENST00000594725 163 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AL512329.2-201ENST00000607350 548 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC245008.1-201ENST00000608123 476 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC090607.5-201ENST00000615692 224 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC092650.2-201ENST00000619984 902 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC127502.3-201ENST00000636170 1206 ntBASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PCDHGA3Q9Y5H0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC002525.1-201ENST00000624392 1622 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RNA5SP183-201ENST00000362452 119 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 Y_RNA.18-201ENST00000362461 102 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RN7SKP185-201ENST00000362813 326 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RNA5SP30-201ENST00000365552 115 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RNU4-2-201ENST00000365668 141 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AL031577.2-201ENST00000404133 280 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 PRELID3BP11-201ENST00000414230 479 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC092634.6-201ENST00000418558 192 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 QRSL1P2-201ENST00000418582 964 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AL136231.1-201ENST00000429407 730 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RPS23P9-201ENST00000448848 438 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 DDX39BP2-208ENST00000453923 258 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RPL32P9-201ENST00000487963 407 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RPL7P38-201ENST00000488396 739 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC231760.1-201ENST00000498002 260 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC104685.1-201ENST00000502445 371 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 AC024558.1-201ENST00000505008 528 ntBASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA3Q9Y5H0 RN7SKP288-201ENST00000516227 268 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms