Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 BCRP9-201ENST00000605312 388 ntBASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 AC098479.1-201ENST00000609225 154 ntBASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 AC107871.2-201ENST00000612894 502 ntBASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 AC096861.1-201ENST00000616652 240 ntBASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 AC130360.2-201ENST00000533477 1556 ntBASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HPS5Q9UPZ3 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 RNU6-238P-201ENST00000363313 106 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 Y_RNA.301-201ENST00000364990 103 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 AL672167.2-201ENST00000377164 879 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 Y_RNA.615-201ENST00000410769 117 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 AL356968.1-201ENST00000416622 474 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 RPA2P2-201ENST00000419698 796 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 HMGB1P7-201ENST00000450921 612 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 RN7SL254P-201ENST00000460609 284 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 RN7SL216P-201ENST00000471607 298 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 AC026254.2-201ENST00000475295 371 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 AC013356.1-201ENST00000489027 564 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 RN7SL284P-201ENST00000498823 275 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 MTCYBP40-201ENST00000509390 1135 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 TRIM77BP-201ENST00000524985 1119 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 NMNAT1P1-201ENST00000554095 876 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 MIR6826-201ENST00000617808 98 ntBASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.87□□□□□ -1.15
HPS5Q9UPZ3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 UGT2B27P-201ENST00000505092 1620 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AC011592.1-201ENST00000624647 3634 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 Y_RNA.100-201ENST00000363141 102 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 RPL23AP32-201ENST00000395315 459 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AL450992.3-201ENST00000413192 568 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AL713922.1-201ENST00000416477 747 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 GAPDHP57-201ENST00000424400 585 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AL158073.1-201ENST00000426848 1104 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AC023347.2-201ENST00000433994 462 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 LSM1P1-201ENST00000438629 273 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AL136380.1-201ENST00000447970 162 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 MRPS31P2-201ENST00000451581 518 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms