Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MIR6885-201ENST00000612241 66 ntBASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 AL138693.1-201ENST00000622219 129 ntBASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 AC020658.2-201ENST00000559030 4020 ntBASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 AC084782.1-201ENST00000564401 2465 ntBASIC8.85□□□□□ -0.99
TRIM35Q9UPQ4 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AC062029.1-202ENST00000606164 3651 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AC093297.3-201ENST00000607056 2517 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 Y_RNA.106-201ENST00000363189 100 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 Y_RNA.376-201ENST00000365638 108 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 Y_RNA.424-201ENST00000384063 103 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 MIR506-201ENST00000384998 124 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 SNORA75.6-201ENST00000391318 127 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 GAPDHP57-201ENST00000424400 585 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 RPL34P27-201ENST00000428810 349 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AL133396.1-201ENST00000432048 687 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 RPL23AP11-201ENST00000475260 469 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AC068993.1-201ENST00000546724 589 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AC130289.1-201ENST00000577321 73 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 GLUD1P4-201ENST00000590914 418 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 BNIP3P25-201ENST00000596023 559 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 BBIP1P1-201ENST00000602999 279 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AC092447.9-201ENST00000603395 144 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AC121334.2-201ENST00000605387 271 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 PISRT1.1-201ENST00000616930 107 ntBASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC8.84□□□□□ -0.99
TRIM35Q9UPQ4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.84□□□□□ -1
TRIM35Q9UPQ4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC004972.1-201ENST00000623934 2209 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 OR56A5-201ENST00000340110 738 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 RNA5SP308-201ENST00000362532 115 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 SNORD113-7-201ENST00000363762 77 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 RNU6-593P-201ENST00000364716 112 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 RNU4-48P-201ENST00000365559 182 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 RNU6-328P-201ENST00000390887 106 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC108032.1-201ENST00000416706 207 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC007283.2-201ENST00000424739 197 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC005019.1-201ENST00000436455 431 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 GAPDHP20-201ENST00000444107 1007 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 FTH1P25-201ENST00000447665 469 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 RN7SKP196-201ENST00000516267 345 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 IGKV2D-23-201ENST00000518179 286 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AP001804.2-201ENST00000533932 910 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC079600.1-201ENST00000550326 297 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC004232.1-201ENST00000571388 208 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 MIR3118-1-201ENST00000581787 76 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC091768.1-201ENST00000609258 930 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 SDR42E1P2-201ENST00000614861 481 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AL354718.1-201ENST00000619764 589 ntBASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms