Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNU6-178P-201ENST00000384631 104 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 MIR134-201ENST00000385258 73 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 RNA5SP372-201ENST00000390836 115 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 RNU4-6P-201ENST00000410804 122 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 HSPE1P12-201ENST00000412576 301 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 AC073335.1-201ENST00000427776 363 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 TPTE2P1-204ENST00000435256 593 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 FCF1P7-201ENST00000451185 558 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 RPL23AP2-201ENST00000471227 466 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 VN1R105P-201ENST00000486595 910 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 KRT19P6-201ENST00000510983 209 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 AF186190.1-201ENST00000517470 480 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 AC093227.2-201ENST00000589357 285 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 RPL32P23-201ENST00000397237 405 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AC009302.1-201ENST00000417147 390 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AC073136.2-201ENST00000417282 849 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AL590609.2-201ENST00000421430 368 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AL158073.1-201ENST00000426848 1104 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 PRELID3BP10-201ENST00000431957 584 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 CDC27P1-201ENST00000445384 715 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AL133244.1-201ENST00000456007 258 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 RPL38P1-201ENST00000460914 211 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AC079804.1-201ENST00000461922 436 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AC100770.1-201ENST00000532310 322 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 MIR5684-201ENST00000585074 65 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 AL353600.1-201ENST00000608148 251 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 OR7M1P-201ENST00000608946 533 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 MTCO1P22-201ENST00000604619 1360 ntBASIC4.47□□□□□ -1.69
NXF3Q9H4D5 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
NXF3Q9H4D5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
NXF3Q9H4D5 CASC19-261ENST00000641853 1638 ntBASIC4.46□□□□□ -1.69
NXF3Q9H4D5 FAM91A3P-201ENST00000456826 2544 ntBASIC4.46□□□□□ -1.69
NXF3Q9H4D5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 RNU1-15P-201ENST00000353977 144 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 SKP1P3-201ENST00000429280 487 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 RPS4XP4-201ENST00000443195 763 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AC022795.1-201ENST00000473808 480 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AC084033.1-201ENST00000550830 633 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 MIR1254-2-201ENST00000579553 63 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 MIR4286-201ENST00000580651 93 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AC053481.4-201ENST00000583164 216 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AL135786.2-201ENST00000608422 615 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AC023509.5-201ENST00000617434 807 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AC015908.5-201ENST00000623289 343 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AL596275.2-204ENST00000641628 552 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AL596275.2-206ENST00000641957 626 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AC092162.3-201ENST00000624511 1624 ntBASIC4.46□□□□□ -1.7
NXF3Q9H4D5 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.46□□□□□ -1.7
NXF3Q9H4D5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NXF3Q9H4D5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms