Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MAPK10-333ENST00000641607 2481 ntBASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 SEC14L3-202ENST00000401751 1794 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 MAPK10-354ENST00000641823 2732 ntBASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 AL133325.3-201ENST00000622757 3674 ntBASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 KCNMA1-225ENST00000626620 3660 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 CPEB1-215ENST00000617958 2776 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ITSN1-201ENST00000379960 3026 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 AC245060.5-201ENST00000610778 3293 ntBASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 NBPF14-204ENST00000611826 1831 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 AC073539.1-201ENST00000599810 2094 ntBASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 TKTL1-201ENST00000369912 2566 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 FBXO8-201ENST00000393674 2577 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ASAP3-209ENST00000495646 2552 ntTSL 2 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 AWAT2-201ENST00000276101 2124 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ZFYVE1-201ENST00000318876 4362 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 SLA-202ENST00000395352 2102 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ALDH1L1-206ENST00000455064 3137 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 AC006946.2-201ENST00000608373 2855 ntBASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 TRMO-207ENST00000611338 3635 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF322-208ENST00000622479 4882 ntAPPRIS P1 TSL 4 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01345-203ENST00000635247 1646 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 NCAM1-221ENST00000615112 5967 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 AC018521.7-201ENST00000580282 2927 ntBASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 DDX50P1-201ENST00000438163 2400 ntBASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 NFKB1-205ENST00000505458 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC22A14-201ENST00000273173 2202 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC6A12-202ENST00000397296 3294 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 LRRC37A4P-202ENST00000581296 5372 ntBASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 TMEM196-202ENST00000405844 4054 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 BTBD18-201ENST00000422652 3044 ntAPPRIS P1 TSL 4 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 PCNX2-205ENST00000430153 1982 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 CDCA7-201ENST00000306721 2789 ntTSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 AC004494.1-201ENST00000613210 2775 ntBASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 PUS7L-202ENST00000416848 4364 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 SMAP2-205ENST00000539317 2501 ntTSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC8A1-202ENST00000402441 3065 ntTSL 2 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP4-4Q9BYR3 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms