Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PHOX2BQ99453 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 Y_RNA.5-201ENST00000362334 102 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 RN7SKP237-201ENST00000364663 301 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 RN7SKP69-201ENST00000365390 305 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 RNA5SP238-201ENST00000365464 120 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 RNU6-641P-201ENST00000384006 107 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 SSXP10-201ENST00000402595 565 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 RN7SKP279-201ENST00000411383 298 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 HMGB3P2-201ENST00000411913 584 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC009302.1-201ENST00000417147 390 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 RPS17P17-201ENST00000419392 409 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 ACTR3BP6-201ENST00000422332 1241 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 RPL12P16-201ENST00000431098 498 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC009518.3-201ENST00000438972 253 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC128713.1-201ENST00000471495 306 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC015820.1-201ENST00000473882 321 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC010655.3-201ENST00000478818 450 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 ATP5LP5-201ENST00000483050 299 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC021382.1-201ENST00000483523 359 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC018797.3-201ENST00000513388 1241 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC068134.3-201ENST00000513620 788 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 HSD3BP3-201ENST00000514706 994 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 SCARNA6-201ENST00000515982 265 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 MYL12AP1-201ENST00000518490 515 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 RN7SL230P-201ENST00000580835 303 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 MIR3614-201ENST00000581261 86 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC245517.5-201ENST00000611529 162 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AL627230.1-201ENST00000613077 211 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 AP001486.3-201ENST00000615334 372 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 SNX18P12-201ENST00000624821 759 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 NAA50-211ENST00000630058 177 ntTSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC027559.1-201ENST00000636288 271 ntBASIC7.3□□□□□ -1.24
PHOX2BQ99453 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PHOX2BQ99453 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.3□□□□□ -1.24
PHOX2BQ99453 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PHOX2BQ99453 RNU6-1115P-201ENST00000362490 106 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 Y_RNA.364-201ENST00000365532 101 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 RNU6-278P-201ENST00000390945 109 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 AL359643.1-201ENST00000404109 423 ntBASIC7.29□□□□□ -1.24
PHOX2BQ99453 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.29□□□□□ -1.24
PHOX2BQ99453 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms