Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 AC109446.2-201ENST00000567872 497 ntBASIC5.54□□□□□ -1.52
PGBD1Q96JS3 MIR3667-201ENST00000581025 74 ntBASIC5.54□□□□□ -1.52
PGBD1Q96JS3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 AC007349.4-201ENST00000608114 532 ntBASIC5.54□□□□□ -1.52
PGBD1Q96JS3 AC116651.1-201ENST00000609724 556 ntBASIC5.54□□□□□ -1.52
PGBD1Q96JS3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PGBD1Q96JS3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AL133270.1-201ENST00000402635 279 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 RNA5SP113-201ENST00000410486 84 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 RN7SKP182-201ENST00000410772 298 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC002524.1-201ENST00000411687 547 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 RSU1P3-201ENST00000412878 835 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AL645608.4-201ENST00000423619 154 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC005189.1-201ENST00000431286 310 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC006466.1-201ENST00000438721 289 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 MTND1P29-201ENST00000448112 647 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 SLC25A18P1-201ENST00000449385 454 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 ATG12P2-201ENST00000456830 416 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 CYCSP34-201ENST00000458172 304 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 RPS3AP22-201ENST00000488297 769 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 RN7SL558P-201ENST00000497468 299 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 BTG4P1-201ENST00000510421 183 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC092593.2-201ENST00000513866 913 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC023050.2-201ENST00000544968 387 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 PCNPP1-201ENST00000552501 511 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 EDDM3DP-201ENST00000554692 434 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC023813.2-201ENST00000564321 469 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 MIR4737-201ENST00000583979 81 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC068790.2-201ENST00000602601 557 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 AC010928.1-201ENST00000592477 1447 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 NAMPTP1-201ENST00000440465 2514 ntBASIC5.53□□□□□ -1.52
PGBD1Q96JS3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PGBD1Q96JS3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.52
PGBD1Q96JS3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 SMG1P4-204ENST00000523028 4131 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 RNU6-249P-201ENST00000363016 102 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 RNA5SP87-201ENST00000384155 118 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 SNORD96B-201ENST00000386148 79 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 Y_RNA.578-201ENST00000390903 88 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AL035419.1-201ENST00000397037 564 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AL136310.1-201ENST00000404926 654 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AL356968.2-201ENST00000412769 1257 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 RPL7P57-201ENST00000423238 740 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AC007559.1-201ENST00000428736 355 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AL772161.1-201ENST00000439130 476 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 EEF1A1P39-201ENST00000440791 250 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 PTENP1-201ENST00000447117 1215 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AL133217.1-201ENST00000450980 425 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 OR11I1P-201ENST00000486033 954 ntBASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.52□□□□□ -1.53
PGBD1Q96JS3 AC073358.1-201ENST00000505671 684 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms