Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-CQ95604 AC068733.2-201ENST00000605434 1418 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.16□□□□□ -1.26
HLA-CQ95604 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-CQ95604 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AL049641.1-201ENST00000441055 1948 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
HLA-CQ95604 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
HLA-CQ95604 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.15□□□□□ -1.26
HLA-CQ95604 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
HLA-CQ95604 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-CQ95604 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-CQ95604 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 HSPE1P11-201ENST00000339579 310 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HLA-CQ95604 EIF5P1-201ENST00000400019 1231 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AL356421.1-201ENST00000403255 413 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AL035422.1-201ENST00000414193 397 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.15□□□□□ -1.26
HLA-CQ95604 ATG3P1-201ENST00000419507 911 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AC093151.1-201ENST00000427711 313 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AC096644.2-201ENST00000429278 159 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AC104058.1-201ENST00000448028 297 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-CQ95604 RPL23AP15-201ENST00000450202 459 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 MRPS31P2-201ENST00000451581 518 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 HMGB1P15-201ENST00000453854 435 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-CQ95604 NXT1P1-201ENST00000458481 316 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AC068228.1-201ENST00000461723 211 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 RN7SL160P-201ENST00000468558 284 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 PPIAP19-201ENST00000486414 492 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 ALDH7A1P3-201ENST00000492517 345 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 Y_RNA.654-201ENST00000497848 106 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AC079140.5-201ENST00000507882 310 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 SOD1P3-201ENST00000518682 454 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AC011979.2-201ENST00000527568 352 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-CQ95604 SETP2-201ENST00000553886 926 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AC018552.3-201ENST00000567416 561 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 CYP4A44P-201ENST00000569984 154 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-CQ95604 GLYATL1P2-202ENST00000588046 902 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AC005357.1-201ENST00000588399 301 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-CQ95604 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AC068790.3-201ENST00000602988 553 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 AL162373.1-201ENST00000620433 407 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.15□□□□□ -1.26
HLA-CQ95604 AC079776.5-201ENST00000641920 211 ntBASIC7.15□□□□□ -1.26
HLA-CQ95604 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.15□□□□□ -1.27
HLA-CQ95604 MTCO1P7-201ENST00000419523 1542 ntBASIC7.15□□□□□ -1.27
HLA-CQ95604 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HLA-CQ95604 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.27
HLA-CQ95604 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
HLA-CQ95604 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC7.15□□□□□ -1.27
HLA-CQ95604 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.15□□□□□ -1.27
HLA-CQ95604 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
HLA-CQ95604 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
HLA-CQ95604 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
HLA-CQ95604 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
HLA-CQ95604 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HLA-CQ95604 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-CQ95604 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-CQ95604 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-CQ95604 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-CQ95604 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-CQ95604 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-CQ95604 PPIAP24-201ENST00000328558 471 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 SET-203ENST00000372688 801 ntTSL 2 BASIC7.14□□□□□ -1.27
HLA-CQ95604 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-CQ95604 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HLA-CQ95604 U3.52-201ENST00000384034 216 ntBASIC7.14□□□□□ -1.27
HLA-CQ95604 RNU6-921P-201ENST00000384361 107 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms