Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.87
LINC01561Q8N1V8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01561Q8N1V8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LINC01561Q8N1V8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01561Q8N1V8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01561Q8N1V8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01561Q8N1V8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01561Q8N1V8 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 MTCO3P31-201ENST00000405526 789 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL355379.1-201ENST00000405542 640 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 OR4K12P-201ENST00000406538 961 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 RN7SKP177-201ENST00000410567 355 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 VDAC1P9-201ENST00000412766 841 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 VN1R37P-201ENST00000419096 748 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 MTCYBP24-201ENST00000420387 1106 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL133325.1-201ENST00000421090 382 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 RPL21P43-201ENST00000425440 472 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 RPL36P19-201ENST00000430744 301 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 CKS1BP5-201ENST00000434172 273 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 RPS29P9-201ENST00000440360 171 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL450023.3-201ENST00000440592 271 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL354714.3-201ENST00000447284 493 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL034418.1-201ENST00000448675 860 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 HMGB3P30-201ENST00000457863 606 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 GAPDHP39-201ENST00000481866 979 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC108145.1-201ENST00000503770 153 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 NAMPTP2-201ENST00000505629 1115 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 VWA8P1-201ENST00000510889 176 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC023141.12-201ENST00000512399 199 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 ARL2BPP5-201ENST00000523141 481 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AGGF1P6-201ENST00000569213 976 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC005255.1-201ENST00000593748 216 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC073091.2-201ENST00000603205 907 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 RPAP2P1-201ENST00000603626 1168 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 FO393422.1-201ENST00000603908 708 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC104687.2-201ENST00000604442 342 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 RPSAP73-201ENST00000614820 330 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC253576.2-201ENST00000618815 580 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC090527.3-201ENST00000619041 548 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC139713.2-210ENST00000641741 992 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AL355578.1-201ENST00000607405 1328 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 AC053481.2-202ENST00000582394 1500 ntBASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01561Q8N1V8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LINC01561Q8N1V8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.38□□□□□ -1.87
LINC01561Q8N1V8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
LINC01561Q8N1V8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.38□□□□□ -1.87
LINC01561Q8N1V8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LINC01561Q8N1V8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LINC01561Q8N1V8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms