Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AC009963.2-201ENST00000453431 138 ntBASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 IFITM8P-201ENST00000522529 394 ntBASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AC009643.1-201ENST00000532030 391 ntBASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AC063950.1-201ENST00000552036 308 ntBASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AC007424.1-203ENST00000554613 687 ntBASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 TVP23BP1-201ENST00000557500 617 ntBASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AL121890.3-201ENST00000618494 516 ntBASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 RNU6-697P-201ENST00000363348 107 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 RNU1-132P-201ENST00000364300 164 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 RPL23AP46-201ENST00000438548 490 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AC146944.2-203ENST00000502493 354 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 PARP4P3-201ENST00000510265 317 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AC139495.1-202ENST00000513164 354 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 IGHV3-32-201ENST00000519182 355 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 OR5M7P-201ENST00000526140 972 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 TRAV11-201ENST00000539512 339 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AP001542.1-201ENST00000591314 200 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 BX323046.1-201ENST00000610145 535 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 AC092162.3-201ENST00000624511 1624 ntBASIC4.67□□□□□ -1.66
CCDC65Q8IXS2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 RNU1-32P-201ENST00000363937 159 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 RNA5SP239-201ENST00000410218 129 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 RNU4-25P-201ENST00000410569 230 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC004552.1-201ENST00000419089 348 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AL592293.2-201ENST00000422292 996 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 CASP3P1-201ENST00000446037 609 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 EIF2S2P2-201ENST00000447161 982 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 RAD23BP3-201ENST00000454157 1152 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 RPS26P3-201ENST00000470205 348 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 RN7SL585P-201ENST00000470538 280 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC090543.2-201ENST00000483963 348 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC004057.1-201ENST00000485827 348 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC017037.1-201ENST00000508460 471 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 RFPL1S-203ENST00000539579 330 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 OR1AB1P-201ENST00000585564 761 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC068790.5-201ENST00000602741 355 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC064801.1-201ENST00000612025 407 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC015922.4-201ENST00000612568 690 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC011944.2-201ENST00000624440 683 ntBASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC65Q8IXS2 AC114546.3-201ENST00000623582 1734 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms