Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MIR1911-201ENST00000410783 80 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 CEACAMP8-201ENST00000413902 580 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 RPS29P7-201ENST00000439662 171 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 RPL21P89-201ENST00000444021 467 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 RAD1P2-201ENST00000446414 663 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 ATP5G1P3-201ENST00000463301 410 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 RN7SL812P-201ENST00000493791 279 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 KCTD9P2-201ENST00000512203 1013 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 SNORA48.9-201ENST00000516419 162 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 HMGB1P19-201ENST00000517578 577 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 SMARCE1P4-201ENST00000523647 241 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 AL352979.3-201ENST00000553515 247 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 AC068714.1-201ENST00000559623 800 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 RPL23AP97-201ENST00000568955 471 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 BNIP3P7-201ENST00000605641 516 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 LINC00901.1-201ENST00000617252 152 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 AC005086.4-201ENST00000623065 213 ntBASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.99□□□□□ -1.61
SHROOM1Q2M3G4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AL133243.3-201ENST00000617415 3004 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC011155.1-201ENST00000316512 456 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AL359837.1-201ENST00000381357 287 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 SNORD65-201ENST00000391079 73 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 DHFRP5-201ENST00000406944 564 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 RN7SKP182-201ENST00000410772 298 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC062016.2-201ENST00000420950 676 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 MRPL50P1-201ENST00000431951 384 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 MAPRE1P3-201ENST00000435438 796 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 RSL24D1P2-201ENST00000445584 366 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 CALM1P2-201ENST00000452941 448 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 RNA5SP103-201ENST00000459503 118 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC091153.1-201ENST00000466297 402 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 FTH1P21-201ENST00000512179 511 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 IGHV3-63-201ENST00000518422 341 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 HMGB1P23-201ENST00000518743 568 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 MED28P5-201ENST00000528254 438 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC084757.1-201ENST00000559987 490 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 AC074029.4-201ENST00000624796 1859 ntBASIC4.98□□□□□ -1.61
SHROOM1Q2M3G4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 RNU6-628P-201ENST00000410675 107 ntBASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 AC009237.10-201ENST00000414112 510 ntBASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 AL389915.1-201ENST00000422463 466 ntBASIC4.97□□□□□ -1.61
SHROOM1Q2M3G4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms