Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GABPAQ06546 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.9□□□□□ -1.63
GABPAQ06546 AC067904.2-201ENST00000517322 1283 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.9□□□□□ -1.63
GABPAQ06546 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.9□□□□□ -1.63
GABPAQ06546 AC074029.2-201ENST00000551045 634 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 AL390334.1-201ENST00000556395 450 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.9□□□□□ -1.63
GABPAQ06546 AC007620.3-201ENST00000608131 497 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 AL138721.1-201ENST00000616756 179 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
GABPAQ06546 RNU6-368P-201ENST00000620928 107 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 RNU6-538P-201ENST00000622329 107 ntBASIC4.9□□□□□ -1.63
GABPAQ06546 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
GABPAQ06546 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GABPAQ06546 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
GABPAQ06546 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.9□□□□□ -1.63
GABPAQ06546 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GABPAQ06546 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GABPAQ06546 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GABPAQ06546 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.89□□□□□ -1.63
GABPAQ06546 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 USP9YP4-201ENST00000424401 1745 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
GABPAQ06546 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
GABPAQ06546 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 RNA5SP513-201ENST00000364648 118 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 RNU1-64P-201ENST00000365443 163 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 RNA5SP296-201ENST00000410523 111 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 SNORA79B-201ENST00000410557 148 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 AL445528.1-201ENST00000426330 420 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.89□□□□□ -1.63
GABPAQ06546 CDC27P1-201ENST00000445384 715 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 AL359073.1-201ENST00000448036 403 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 OR52A4P-202ENST00000481634 799 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.89□□□□□ -1.63
GABPAQ06546 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.89□□□□□ -1.63
GABPAQ06546 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.89□□□□□ -1.63
GABPAQ06546 AC004241.3-201ENST00000611728 517 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 LINC00216-201ENST00000623548 1126 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.89□□□□□ -1.63
GABPAQ06546 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.89□□□□□ -1.63
GABPAQ06546 CDRT1-208ENST00000630868 794 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.89□□□□□ -1.63
GABPAQ06546 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
GABPAQ06546 AC126323.6-202ENST00000568092 3511 ntBASIC4.89□□□□□ -1.63
GABPAQ06546 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
GABPAQ06546 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GABPAQ06546 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
GABPAQ06546 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GABPAQ06546 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
GABPAQ06546 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.88□□□□□ -1.63
GABPAQ06546 AC025750.1-201ENST00000399891 379 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GABPAQ06546 AL590623.1-201ENST00000427864 105 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 SKP1P3-201ENST00000429280 487 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.88□□□□□ -1.63
GABPAQ06546 RSL24D1P8-201ENST00000434442 492 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 MRPS33P4-201ENST00000434892 317 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 AL513343.1-201ENST00000451818 792 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.88□□□□□ -1.63
GABPAQ06546 EIF2S2P4-201ENST00000461070 984 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 AC079804.1-201ENST00000461922 436 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 AC012158.1-204ENST00000483430 465 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.88□□□□□ -1.63
GABPAQ06546 RNU6-760P-201ENST00000516078 97 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 RNU6-491P-201ENST00000516099 110 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.88□□□□□ -1.63
GABPAQ06546 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.88□□□□□ -1.63
GABPAQ06546 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.88□□□□□ -1.63
GABPAQ06546 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.88□□□□□ -1.63
GABPAQ06546 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.88□□□□□ -1.63
GABPAQ06546 DPRXP4-201ENST00000578053 568 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.88□□□□□ -1.63
GABPAQ06546 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.88□□□□□ -1.63
GABPAQ06546 BMS1P7-201ENST00000602440 1052 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 AL161637.1-201ENST00000622380 412 ntBASIC4.88□□□□□ -1.63
GABPAQ06546 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
GABPAQ06546 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
GABPAQ06546 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
GABPAQ06546 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GABPAQ06546 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
GABPAQ06546 CASC19-261ENST00000641853 1638 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.87□□□□□ -1.63
GABPAQ06546 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GABPAQ06546 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GABPAQ06546 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GABPAQ06546 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.87□□□□□ -1.63
GABPAQ06546 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms