Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PRRC2CP1-201ENST00000404428 159 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 VN1R51P-201ENST00000411675 945 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 PRELID3BP11-201ENST00000414230 479 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 RPS27AP7-201ENST00000422792 455 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDL3P58872 AC016712.1-201ENST00000431088 378 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC004865.1-201ENST00000442276 1003 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDL3P58872 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDL3P58872 RN7SL481P-201ENST00000477764 299 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 RN7SL558P-201ENST00000497468 299 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 AC005351.1-201ENST00000511152 786 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.75□□□□□ -1.49
RHBDL3P58872 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDL3P58872 AC133555.2-201ENST00000550213 292 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDL3P58872 ZNF971P-201ENST00000562068 1249 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC122134.1-202ENST00000569111 1201 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDL3P58872 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDL3P58872 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDL3P58872 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDL3P58872 AC002487.1-201ENST00000604565 994 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC007390.2-201ENST00000606229 3803 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC017076.1-201ENST00000607613 578 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDL3P58872 RNA5SP439-201ENST00000617595 124 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC009269.6-201ENST00000621778 588 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDL3P58872 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDL3P58872 AL356118.1-201ENST00000635272 1078 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDL3P58872 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDL3P58872 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDL3P58872 Z95114.1-201ENST00000624264 14574 ntBASIC5.75□□□□□ -1.49
RHBDL3P58872 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDL3P58872 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
RHBDL3P58872 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDL3P58872 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDL3P58872 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 ADAM24P-201ENST00000398655 2101 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 TLK1P1-201ENST00000456760 2440 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RHBDL3P58872 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.74□□□□□ -1.49
RHBDL3P58872 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 ANKRD36P1-201ENST00000344424 659 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 OR51B3P-201ENST00000412287 913 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AC068287.1-201ENST00000430283 295 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 HMGB1P45-201ENST00000435986 653 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 AC234064.1-201ENST00000436312 247 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 AC016831.4-201ENST00000438302 307 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDL3P58872 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 HMGB1P21-201ENST00000502313 581 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 AC073358.1-201ENST00000505671 684 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AC008837.1-201ENST00000511513 412 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.74□□□□□ -1.49
RHBDL3P58872 TCP11X3P-202ENST00000514289 1254 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 AC097486.1-201ENST00000515331 210 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AC118942.1-201ENST00000529674 1035 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.74□□□□□ -1.49
RHBDL3P58872 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RHBDL3P58872 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AC069304.3-201ENST00000603938 1084 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 BNIP3P41-202ENST00000616656 861 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 AP002512.4-202ENST00000641599 4530 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.74□□□□□ -1.49
RHBDL3P58872 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RHBDL3P58872 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RHBDL3P58872 SGO1P1-201ENST00000603525 1447 ntBASIC5.74□□□□□ -1.49
RHBDL3P58872 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RHBDL3P58872 AC063976.2-201ENST00000425667 3556 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms