Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK1P53667 BUD31P1-201ENST00000521828 359 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.79□□□□□ -1.64
LIMK1P53667 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK1P53667 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK1P53667 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK1P53667 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK1P53667 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.79□□□□□ -1.64
LIMK1P53667 MIR4429-201ENST00000580105 73 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 AC069366.1-201ENST00000583159 838 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 AC015911.5-201ENST00000587076 451 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK1P53667 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.79□□□□□ -1.64
LIMK1P53667 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK1P53667 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.79□□□□□ -1.64
LIMK1P53667 AC024023.1-201ENST00000624530 922 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 AP000843.1-201ENST00000624880 701 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 OR8B1P-202ENST00000641132 1178 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 OR2L1P-202ENST00000641567 1023 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK1P53667 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
LIMK1P53667 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
LIMK1P53667 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LIMK1P53667 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LIMK1P53667 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK1P53667 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK1P53667 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
LIMK1P53667 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK1P53667 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK1P53667 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK1P53667 SNORA62.2-201ENST00000364672 152 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 ATF1P1-201ENST00000406040 927 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 UBE2V1P11-201ENST00000411559 285 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 PCNPP4-201ENST00000414817 517 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 UQCRBP1-201ENST00000421129 336 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 RPL30P3-201ENST00000424262 333 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 UBE2V1P6-201ENST00000430840 422 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 RPL35AP21-201ENST00000437667 333 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK1P53667 AC092685.1-201ENST00000447960 1243 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 TPMTP4-201ENST00000450749 678 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK1P53667 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK1P53667 AL445433.1-201ENST00000457507 257 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 S100A11P1-201ENST00000477525 312 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AP002812.1-201ENST00000495378 474 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK1P53667 HMGB3P16-201ENST00000508037 287 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AC015795.1-201ENST00000513669 327 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK1P53667 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.78□□□□□ -1.64
LIMK1P53667 AC068831.4-201ENST00000556118 109 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK1P53667 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK1P53667 AC106785.3-201ENST00000564064 847 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK1P53667 NF1P5-201ENST00000588287 448 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AC010680.3-201ENST00000604215 520 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AC011626.1-201ENST00000604710 562 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AC120053.1-201ENST00000607706 736 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK1P53667 AC007497.1-201ENST00000610421 561 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK1P53667 ZYXP1-201ENST00000617638 118 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AL109620.1-201ENST00000618738 1197 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 AL163051.2-201ENST00000618976 735 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LIMK1P53667 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LIMK1P53667 MTND5P11-201ENST00000511037 1812 ntBASIC4.78□□□□□ -1.64
LIMK1P53667 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK1P53667 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK1P53667 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK1P53667 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
LIMK1P53667 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK1P53667 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK1P53667 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK1P53667 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.78□□□□□ -1.65
LIMK1P53667 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK1P53667 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK1P53667 AL356489.2-201ENST00000566968 3528 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 AC090229.1-201ENST00000590983 1609 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LIMK1P53667 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK1P53667 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 AP001324.1-201ENST00000428553 399 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 OR2B7P-201ENST00000429302 934 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK1P53667 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK1P53667 MOB1AP2-201ENST00000446060 614 ntBASIC4.77□□□□□ -1.65
LIMK1P53667 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK1P53667 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms