Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RPS26P30-201ENST00000443431 335 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TM4SF4P48230 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
TM4SF4P48230 AC005412.2-201ENST00000492004 341 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 AP002812.1-201ENST00000495378 474 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 AC091868.1-201ENST00000508746 304 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.55□□□□□ -1.52
TM4SF4P48230 RNU6-311P-201ENST00000516224 102 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 RNU6-347P-201ENST00000516658 105 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 SNORA67.7-201ENST00000516664 135 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM4SF4P48230 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.55□□□□□ -1.52
TM4SF4P48230 AP001372.4-201ENST00000524889 472 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.55□□□□□ -1.52
TM4SF4P48230 PCNAP1-202ENST00000595299 752 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
TM4SF4P48230 AL445435.1-201ENST00000604232 665 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 AC090948.1-201ENST00000607464 549 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 AC012409.3-201ENST00000611343 981 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 AC108359.1-201ENST00000616451 1211 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 BX005214.3-202ENST00000619809 325 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 AP005019.3-201ENST00000620418 560 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.55□□□□□ -1.52
TM4SF4P48230 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.55□□□□□ -1.52
TM4SF4P48230 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.55□□□□□ -1.52
TM4SF4P48230 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.55□□□□□ -1.52
TM4SF4P48230 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM4SF4P48230 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.55□□□□□ -1.52
TM4SF4P48230 SMG1P6-201ENST00000532337 2930 ntBASIC5.55□□□□□ -1.52
TM4SF4P48230 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
TM4SF4P48230 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.55□□□□□ -1.52
TM4SF4P48230 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM4SF4P48230 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.55□□□□□ -1.52
TM4SF4P48230 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM4SF4P48230 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.55□□□□□ -1.52
TM4SF4P48230 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM4SF4P48230 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM4SF4P48230 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM4SF4P48230 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.54□□□□□ -1.52
TM4SF4P48230 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM4SF4P48230 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM4SF4P48230 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.54□□□□□ -1.52
TM4SF4P48230 STX3-208ENST00000641815 3236 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.54□□□□□ -1.52
TM4SF4P48230 AC134882.1-201ENST00000603738 1676 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM4SF4P48230 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM4SF4P48230 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TM4SF4P48230 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TM4SF4P48230 RNU6-906P-201ENST00000384700 70 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 MTCO1P56-201ENST00000401674 224 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 RN7SKP267-201ENST00000410381 285 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.54□□□□□ -1.52
TM4SF4P48230 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.54□□□□□ -1.52
TM4SF4P48230 LINC00993-201ENST00000420453 540 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
TM4SF4P48230 AC099336.2-201ENST00000422457 254 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.54□□□□□ -1.52
TM4SF4P48230 RPL7AP49-201ENST00000429522 581 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 RPS29P17-201ENST00000430795 166 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TM4SF4P48230 AL591438.1-201ENST00000433508 581 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 OR4C10P-201ENST00000434991 931 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 ELOCP11-201ENST00000436690 332 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 ACTR3P2-201ENST00000439585 1257 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 ELOCP16-201ENST00000444494 332 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 NPM1P13-201ENST00000452663 865 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.54□□□□□ -1.52
TM4SF4P48230 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM4SF4P48230 AC099560.2-201ENST00000457554 255 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 RPS17P2-201ENST00000461663 408 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 AC113420.1-201ENST00000507903 571 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.54□□□□□ -1.52
TM4SF4P48230 SNORA31.9-201ENST00000516429 84 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.54□□□□□ -1.52
TM4SF4P48230 AL049839.1-201ENST00000556151 657 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.54□□□□□ -1.52
TM4SF4P48230 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.54□□□□□ -1.52
TM4SF4P48230 AGGF1P5-201ENST00000567900 919 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 AC053481.3-201ENST00000577881 843 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
TM4SF4P48230 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM4SF4P48230 AC010487.1-201ENST00000594408 1172 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.54□□□□□ -1.52
TM4SF4P48230 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.54□□□□□ -1.52
TM4SF4P48230 AL583856.2-201ENST00000606298 543 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 AC116447.1-201ENST00000613153 453 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.54□□□□□ -1.52
TM4SF4P48230 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.54□□□□□ -1.52
TM4SF4P48230 OR2L1P-202ENST00000641567 1023 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 SOCS5P3-201ENST00000425115 1576 ntBASIC5.54□□□□□ -1.52
TM4SF4P48230 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM4SF4P48230 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TM4SF4P48230 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.53□□□□□ -1.52
TM4SF4P48230 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TM4SF4P48230 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.53□□□□□ -1.52
TM4SF4P48230 AC008758.3-201ENST00000507003 1829 ntBASIC5.53□□□□□ -1.52
TM4SF4P48230 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM4SF4P48230 RNU1-94P-201ENST00000362627 173 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms