Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 RPL39P6-201ENST00000448289 150 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC097493.1-201ENST00000463958 372 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 RN7SL352P-201ENST00000466002 277 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC017015.1-201ENST00000477387 286 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC3P19447 TPM3P3-201ENST00000521343 354 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 AP003392.2-201ENST00000527269 208 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC3P19447 AP002963.1-201ENST00000530590 184 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AC090515.3-201ENST00000560431 315 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AGGF1P8-201ENST00000562979 1000 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.77□□□□□ -1.33
ERCC3P19447 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC092354.2-201ENST00000607786 514 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AC079395.2-201ENST00000610982 737 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC018816.2-201ENST00000621460 353 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AC012414.7-202ENST00000622705 1090 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 OR11H2-202ENST00000641517 1085 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.77□□□□□ -1.33
ERCC3P19447 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
ERCC3P19447 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC3P19447 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC3P19447 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ERCC3P19447 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC3P19447 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
ERCC3P19447 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 AC016583.1-201ENST00000624221 2431 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.76□□□□□ -1.33
ERCC3P19447 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ERCC3P19447 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 OR9K1P-201ENST00000326513 941 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC3P19447 RNU6-462P-201ENST00000362659 105 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 RN7SKP162-201ENST00000363605 345 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ERCC3P19447 AL355433.1-201ENST00000422804 300 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 MTCO3P30-201ENST00000426425 670 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AC099677.3-201ENST00000427081 395 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.76□□□□□ -1.33
ERCC3P19447 CYCSP12-201ENST00000437729 300 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 CEACAMP9-201ENST00000442990 513 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC3P19447 AL163193.1-201ENST00000444895 788 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 SDC4P-201ENST00000453285 601 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 RNA5SP269-201ENST00000459032 137 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 RN7SL72P-201ENST00000460697 269 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AL603882.1-201ENST00000463059 681 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 SRRM1P2-201ENST00000464531 1192 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 RPS17P15-201ENST00000475609 349 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 RPL7P16-201ENST00000479738 738 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AC099521.1-201ENST00000482557 334 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC3P19447 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.76□□□□□ -1.33
ERCC3P19447 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC3P19447 RNA5SP216-201ENST00000516111 123 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
ERCC3P19447 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 PMS2P3-207ENST00000529061 717 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.76□□□□□ -1.33
ERCC3P19447 AC010546.1-201ENST00000569391 485 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 MIR4504-201ENST00000577413 92 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC6.76□□□□□ -1.33
ERCC3P19447 MIR1273E-201ENST00000581165 102 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC3P19447 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC3P19447 BNIP3P23-201ENST00000599655 511 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 AC145423.1-201ENST00000605712 336 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.76□□□□□ -1.33
ERCC3P19447 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.76□□□□□ -1.33
ERCC3P19447 AL139099.4-201ENST00000614802 114 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 AL049536.1-201ENST00000625043 744 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
ERCC3P19447 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 AL355834.1-201ENST00000556602 3965 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.76□□□□□ -1.33
ERCC3P19447 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms