Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.64□□□□□ -1.35
LIG1P18858 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LIG1P18858 AC008033.1-201ENST00000216407 1162 ntBASIC6.64□□□□□ -1.35
LIG1P18858 HMGB1P5-201ENST00000255320 642 ntBASIC6.64□□□□□ -1.35
LIG1P18858 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
LIG1P18858 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LIG1P18858 RN7SKP185-201ENST00000362813 326 ntBASIC6.64□□□□□ -1.35
LIG1P18858 RNU4-12P-201ENST00000365233 139 ntBASIC6.64□□□□□ -1.35
LIG1P18858 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 GNG5P5-201ENST00000420444 220 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.64□□□□□ -1.35
LIG1P18858 AC012498.1-201ENST00000424037 437 ntBASIC6.64□□□□□ -1.35
LIG1P18858 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 AC138761.5-201ENST00000433967 325 ntBASIC6.64□□□□□ -1.35
LIG1P18858 SEPT7P5-201ENST00000434048 306 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AC092427.1-201ENST00000439177 601 ntBASIC6.64□□□□□ -1.35
LIG1P18858 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 RN7SL269P-201ENST00000467795 305 ntBASIC6.64□□□□□ -1.35
LIG1P18858 RPS3AP17-201ENST00000472594 777 ntBASIC6.64□□□□□ -1.35
LIG1P18858 RPS4XP15-201ENST00000489210 795 ntBASIC6.64□□□□□ -1.35
LIG1P18858 LSM3P4-201ENST00000502948 309 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AC105252.1-201ENST00000503089 286 ntBASIC6.64□□□□□ -1.35
LIG1P18858 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LIG1P18858 AC022483.1-201ENST00000514020 567 ntBASIC6.64□□□□□ -1.35
LIG1P18858 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.64□□□□□ -1.35
LIG1P18858 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.64□□□□□ -1.35
LIG1P18858 GLYCAM1-201ENST00000546596 285 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AC025260.1-201ENST00000548858 430 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.64□□□□□ -1.35
LIG1P18858 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.64□□□□□ -1.35
LIG1P18858 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.64□□□□□ -1.35
LIG1P18858 RPA2P1-201ENST00000556557 721 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 AL163952.1-202ENST00000569625 600 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.64□□□□□ -1.35
LIG1P18858 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LIG1P18858 AL390838.2-201ENST00000602394 274 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AC128687.2-201ENST00000609657 566 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AL121890.2-201ENST00000617644 465 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.64□□□□□ -1.35
LIG1P18858 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.64□□□□□ -1.35
LIG1P18858 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
LIG1P18858 AL354685.2-201ENST00000448218 1447 ntBASIC6.64□□□□□ -1.35
LIG1P18858 AC106872.5-201ENST00000508856 1416 ntBASIC6.64□□□□□ -1.35
LIG1P18858 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.64□□□□□ -1.35
LIG1P18858 QRSL1P1-201ENST00000400977 1540 ntBASIC6.64□□□□□ -1.35
LIG1P18858 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LIG1P18858 PABPC1P9-201ENST00000426076 1612 ntBASIC6.64□□□□□ -1.35
LIG1P18858 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
LIG1P18858 AP004607.3-201ENST00000530354 3915 ntBASIC6.64□□□□□ -1.35
LIG1P18858 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.64□□□□□ -1.35
LIG1P18858 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LIG1P18858 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 AC104964.3-201ENST00000606115 2860 ntBASIC6.63□□□□□ -1.35
LIG1P18858 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LIG1P18858 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LIG1P18858 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.63□□□□□ -1.35
LIG1P18858 RNU6-181P-201ENST00000363225 107 ntBASIC6.63□□□□□ -1.35
LIG1P18858 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.63□□□□□ -1.35
LIG1P18858 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 XGY1-201ENST00000381172 446 ntBASIC6.63□□□□□ -1.35
LIG1P18858 EI24P3-201ENST00000399046 1062 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC092745.2-202ENST00000411880 369 ntBASIC6.63□□□□□ -1.35
LIG1P18858 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LIG1P18858 AL354890.1-201ENST00000413730 346 ntBASIC6.63□□□□□ -1.35
LIG1P18858 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.63□□□□□ -1.35
LIG1P18858 MTCO1P23-201ENST00000415223 1526 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.63□□□□□ -1.35
LIG1P18858 AC093084.1-201ENST00000424233 687 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.63□□□□□ -1.35
LIG1P18858 AP001324.1-201ENST00000428553 399 ntBASIC6.63□□□□□ -1.35
LIG1P18858 RPL31P54-201ENST00000429803 370 ntBASIC6.63□□□□□ -1.35
LIG1P18858 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.63□□□□□ -1.35
LIG1P18858 UBE2V1P3-201ENST00000439651 417 ntBASIC6.63□□□□□ -1.35
LIG1P18858 MED28P3-201ENST00000444288 531 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AL445466.1-201ENST00000448432 357 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC005077.1-201ENST00000449226 375 ntBASIC6.63□□□□□ -1.35
LIG1P18858 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.63□□□□□ -1.35
LIG1P18858 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.63□□□□□ -1.35
LIG1P18858 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.63□□□□□ -1.35
LIG1P18858 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.63□□□□□ -1.35
LIG1P18858 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.63□□□□□ -1.35
LIG1P18858 AC094085.1-201ENST00000468914 584 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC079841.1-201ENST00000481228 950 ntBASIC6.63□□□□□ -1.35
LIG1P18858 DYNLL1P6-201ENST00000503440 264 ntBASIC6.63□□□□□ -1.35
LIG1P18858 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms