Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC114878.2-201ENST00000604863 1251 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 AC093424.1-201ENST00000604999 338 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 AC079395.3-201ENST00000615161 484 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 uc_338.13-201ENST00000618243 179 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 MTND2P41-201ENST00000637599 773 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.11□□□□□ -1.59
HOXC6P09630 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HOXC6P09630 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HOXC6P09630 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC6P09630 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXC6P09630 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC6P09630 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HOXC6P09630 AL672167.1-204ENST00000641875 3017 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HOXC6P09630 AC008033.1-201ENST00000216407 1162 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 RNU4-40P-201ENST00000364351 143 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 SNORA11F-201ENST00000408237 128 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 TCP1P3-201ENST00000414406 1498 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AL445487.1-201ENST00000415694 1580 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AL139095.3-201ENST00000419672 1203 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC6P09630 BMS1P19-201ENST00000433925 393 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC6P09630 ARL5AP3-201ENST00000439327 386 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC6P09630 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC6P09630 EXOSC3P1-201ENST00000448649 500 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC6P09630 SEPT7P3-201ENST00000455017 621 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 RPS20P4-201ENST00000461659 355 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 NPM1P29-201ENST00000483112 803 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 PPM1AP1-201ENST00000502740 1135 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC6P09630 AC108475.1-201ENST00000507880 950 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC6P09630 AC121161.1-201ENST00000510606 652 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC6P09630 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC6P09630 AC119751.5-201ENST00000514077 770 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 SNORA19.3-201ENST00000516165 130 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 RN7SKP287-201ENST00000516546 266 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC6P09630 MED28P5-201ENST00000528254 438 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AL122126.1-201ENST00000546905 1318 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC6P09630 AC090515.3-201ENST00000560431 315 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC6P09630 AC006130.2-201ENST00000586202 326 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 HMGB2P1-201ENST00000591146 634 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 ELOCP35-201ENST00000604289 336 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC6P09630 MIR6891-201ENST00000618788 93 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AC015804.1-201ENST00000622935 435 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 AL731532.2-201ENST00000623542 1953 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC6P09630 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 CASC19-206ENST00000641028 1430 ntBASIC5.1□□□□□ -1.59
HOXC6P09630 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC6P09630 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HOXC6P09630 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC6P09630 AC107068.1-201ENST00000563286 4218 ntBASIC5.09□□□□□ -1.59
HOXC6P09630 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC6P09630 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HOXC6P09630 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC6P09630 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC6P09630 CR382285.2-201ENST00000624662 1495 ntBASIC5.09□□□□□ -1.59
HOXC6P09630 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC6P09630 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HOXC6P09630 MIR383-201ENST00000362257 73 ntBASIC5.09□□□□□ -1.59
HOXC6P09630 RN7SKP224-201ENST00000364140 325 ntBASIC5.09□□□□□ -1.59
HOXC6P09630 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC6P09630 VN1R51P-201ENST00000411675 945 ntBASIC5.09□□□□□ -1.59
HOXC6P09630 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC6P09630 ELOCP11-201ENST00000436690 332 ntBASIC5.09□□□□□ -1.59
HOXC6P09630 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC6P09630 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC6P09630 ELOCP16-201ENST00000444494 332 ntBASIC5.09□□□□□ -1.59
HOXC6P09630 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC6P09630 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC6P09630 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC6P09630 SNORA84-201ENST00000459229 133 ntBASIC5.09□□□□□ -1.59
HOXC6P09630 MTCO2P6-201ENST00000463134 685 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms