Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SEMA3DO95025 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
SEMA3DO95025 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SEMA3DO95025 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SEMA3DO95025 XIAPP3-201ENST00000312918 795 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SEMA3DO95025 Y_RNA.62-201ENST00000362840 99 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.09□□□□□ -1.75
SEMA3DO95025 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.09□□□□□ -1.75
SEMA3DO95025 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.09□□□□□ -1.75
SEMA3DO95025 AC245028.1-201ENST00000423259 256 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 MTND2P11-201ENST00000423638 648 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.09□□□□□ -1.75
SEMA3DO95025 YWHAEP5-201ENST00000431545 765 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 RPL23AP52-201ENST00000439311 478 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 RPS20P4-201ENST00000461659 355 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 SEPT7P6-201ENST00000469999 1143 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.09□□□□□ -1.75
SEMA3DO95025 RN7SL205P-201ENST00000490174 284 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 AC020593.1-201ENST00000507399 299 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.09□□□□□ -1.75
SEMA3DO95025 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.09□□□□□ -1.75
SEMA3DO95025 RNA5SP73-201ENST00000516744 108 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.09□□□□□ -1.75
SEMA3DO95025 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.09□□□□□ -1.75
SEMA3DO95025 IGHV3-32-201ENST00000519182 355 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 IFITM8P-201ENST00000522529 394 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 SMARCE1P4-201ENST00000523647 241 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SEMA3DO95025 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.09□□□□□ -1.75
SEMA3DO95025 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.09□□□□□ -1.75
SEMA3DO95025 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.09□□□□□ -1.75
SEMA3DO95025 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.09□□□□□ -1.75
SEMA3DO95025 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.09□□□□□ -1.75
SEMA3DO95025 AL354984.3-201ENST00000604803 325 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.09□□□□□ -1.75
SEMA3DO95025 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SEMA3DO95025 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.09□□□□□ -1.75
SEMA3DO95025 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.75
SEMA3DO95025 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SEMA3DO95025 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.09□□□□□ -1.75
SEMA3DO95025 SYT14P1-202ENST00000600441 1448 ntBASIC4.09□□□□□ -1.75
SEMA3DO95025 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SEMA3DO95025 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SEMA3DO95025 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
SEMA3DO95025 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SEMA3DO95025 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.08□□□□□ -1.76
SEMA3DO95025 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SEMA3DO95025 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SEMA3DO95025 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.08□□□□□ -1.76
SEMA3DO95025 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.08□□□□□ -1.76
SEMA3DO95025 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SEMA3DO95025 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 AL157831.1-201ENST00000426134 473 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.08□□□□□ -1.76
SEMA3DO95025 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.08□□□□□ -1.76
SEMA3DO95025 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.08□□□□□ -1.76
SEMA3DO95025 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.08□□□□□ -1.76
SEMA3DO95025 Z95152.1-201ENST00000453556 656 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SEMA3DO95025 RPL23AP24-201ENST00000458203 385 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.08□□□□□ -1.76
SEMA3DO95025 HAUS1P1-201ENST00000505275 832 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 PARP4P3-201ENST00000510265 317 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 OR5M7P-201ENST00000526140 972 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.08□□□□□ -1.76
SEMA3DO95025 TOMM20P2-201ENST00000540082 421 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.08□□□□□ -1.76
SEMA3DO95025 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.08□□□□□ -1.76
SEMA3DO95025 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SEMA3DO95025 MIR4443-201ENST00000585052 53 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.08□□□□□ -1.76
SEMA3DO95025 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.08□□□□□ -1.76
SEMA3DO95025 VN1R79P-201ENST00000593540 513 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 MIR432-201ENST00000606207 94 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 FAM27D1-201ENST00000612308 341 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SEMA3DO95025 AP000346.3-201ENST00000622821 210 ntBASIC4.08□□□□□ -1.76
SEMA3DO95025 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SEMA3DO95025 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SEMA3DO95025 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SEMA3DO95025 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SEMA3DO95025 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SEMA3DO95025 AC053481.2-202ENST00000582394 1500 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEMA3DO95025 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
SEMA3DO95025 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.07□□□□□ -1.76
SEMA3DO95025 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.07□□□□□ -1.76
SEMA3DO95025 RNA5SP447-201ENST00000363749 119 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.07□□□□□ -1.76
SEMA3DO95025 AC016769.2-201ENST00000414815 475 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 P2RY10P2-201ENST00000416730 913 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.07□□□□□ -1.76
SEMA3DO95025 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.07□□□□□ -1.76
SEMA3DO95025 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.07□□□□□ -1.76
SEMA3DO95025 AC239809.1-201ENST00000450470 217 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 SBDSP1-204ENST00000453858 737 ntBASIC4.07□□□□□ -1.76
SEMA3DO95025 RAD23BP3-201ENST00000454157 1152 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 354.3 ms