Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.77□□□□□ -1.81
SNRNP200O75643 AC233702.9-201ENST00000581528 203 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 AC124312.6-202ENST00000623624 418 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNRNP200O75643 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNRNP200O75643 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNRNP200O75643 SCN1A-220ENST00000641603 12506 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 AC007390.2-201ENST00000606229 3803 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNRNP200O75643 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNRNP200O75643 AC104118.1-201ENST00000607625 1589 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.77□□□□□ -1.81
SNRNP200O75643 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.77□□□□□ -1.81
SNRNP200O75643 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 OR51C1P-202ENST00000641159 1444 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNRNP200O75643 SNORA60-201ENST00000362396 134 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 SNORA68.2-201ENST00000391263 128 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 RN7SL542P-201ENST00000467147 294 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SNRNP200O75643 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.77□□□□□ -1.81
SNRNP200O75643 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.77□□□□□ -1.81
SNRNP200O75643 RN7SKP141-201ENST00000516167 338 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.77□□□□□ -1.81
SNRNP200O75643 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.77□□□□□ -1.81
SNRNP200O75643 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.77□□□□□ -1.81
SNRNP200O75643 AL592436.1-201ENST00000605135 558 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 RNU1-30P-201ENST00000606575 163 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 AF001550.2-201ENST00000636643 217 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNRNP200O75643 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
SNRNP200O75643 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 MFSD8-236ENST00000641509 4050 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.77□□□□□ -1.81
SNRNP200O75643 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
SNRNP200O75643 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.76□□□□□ -1.81
SNRNP200O75643 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 RNA5SP124-201ENST00000362739 110 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 TRAV35-201ENST00000390462 330 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.76□□□□□ -1.81
SNRNP200O75643 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.76□□□□□ -1.81
SNRNP200O75643 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.76□□□□□ -1.81
SNRNP200O75643 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.76□□□□□ -1.81
SNRNP200O75643 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.76□□□□□ -1.81
SNRNP200O75643 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.76□□□□□ -1.81
SNRNP200O75643 MIR6868-201ENST00000611215 58 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.76□□□□□ -1.81
SNRNP200O75643 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
SNRNP200O75643 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
SNRNP200O75643 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
SNRNP200O75643 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SNRNP200O75643 AC025750.1-201ENST00000399891 379 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 HDGFP1-201ENST00000405943 252 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 HMGB3P5-201ENST00000428894 612 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 AL133547.1-201ENST00000448546 220 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.76□□□□□ -1.81
SNRNP200O75643 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.76□□□□□ -1.81
SNRNP200O75643 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.76□□□□□ -1.81
SNRNP200O75643 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.76□□□□□ -1.81
SNRNP200O75643 AC022695.1-201ENST00000522089 237 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 MTND1P6-201ENST00000523621 946 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 AC068254.2-201ENST00000623938 3577 ntBASIC3.76□□□□□ -1.81
SNRNP200O75643 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNRNP200O75643 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.75□□□□□ -1.81
SNRNP200O75643 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SNRNP200O75643 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.75□□□□□ -1.81
SNRNP200O75643 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SNRNP200O75643 RN7SKP227-201ENST00000364445 330 ntBASIC3.75□□□□□ -1.81
SNRNP200O75643 U1.1-201ENST00000384101 164 ntBASIC3.75□□□□□ -1.81
SNRNP200O75643 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.75□□□□□ -1.81
SNRNP200O75643 SEPT7P3-201ENST00000455017 621 ntBASIC3.75□□□□□ -1.81
SNRNP200O75643 AC006499.6-201ENST00000511169 607 ntBASIC3.75□□□□□ -1.81
SNRNP200O75643 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.75□□□□□ -1.81
SNRNP200O75643 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.75□□□□□ -1.81
SNRNP200O75643 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 AC073530.2-201ENST00000623987 261 ntBASIC3.75□□□□□ -1.81
SNRNP200O75643 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.75□□□□□ -1.81
SNRNP200O75643 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SNRNP200O75643 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNRNP200O75643 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms