Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC006466.1-201ENST00000438721 289 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 ATP5C1P1-201ENST00000441945 895 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC108161.1-201ENST00000461060 402 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AC021660.1-201ENST00000465006 554 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VPS4BO75351 BZW1P2-201ENST00000473537 826 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 RPS21P4-201ENST00000487122 248 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS4BO75351 WBP1LP4-201ENST00000505043 344 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 FTH1P11-201ENST00000517577 551 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS4BO75351 AP001317.1-201ENST00000531194 960 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AP002373.2-201ENST00000541631 1060 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 CR383656.6-201ENST00000550518 394 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC022069.1-201ENST00000582910 658 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 AL451074.6-201ENST00000608512 729 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AL139418.1-201ENST00000613613 177 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AC122133.1-201ENST00000613964 233 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AC090246.1-201ENST00000616499 426 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AP001784.1-201ENST00000624107 428 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AP003400.3-201ENST00000624904 346 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 TCP11X1-202ENST00000622971 1372 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 ECM1P2-201ENST00000503354 1577 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS4BO75351 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 SAMMSON-213ENST00000641336 1521 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS4BO75351 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 AL391994.1-201ENST00000254724 282 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 RNU4-2-201ENST00000365668 141 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 AL590084.2-201ENST00000401481 382 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AL589647.1-201ENST00000402485 466 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 NUDT19P3-201ENST00000404698 555 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 VN1R54P-201ENST00000435210 1049 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 OR6D1P-201ENST00000436165 939 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 MTND3P1-201ENST00000441336 220 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 RPL21P133-201ENST00000443666 476 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 MTCO2P25-201ENST00000447065 681 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 MTCO2P18-201ENST00000457151 658 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms