Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CR381572.2-201ENST00000624852 397 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC058791.1-201ENST00000608412 3198 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AL513302.2-201ENST00000562313 1842 ntBASIC2.21□□□□□ -2.05
CHKB-CPT1BH3BT56 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 SNORA17.1-201ENST00000362945 126 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AL133270.1-201ENST00000402635 279 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 HSPE1P8-201ENST00000406997 288 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 XKRYP4-201ENST00000414395 483 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL23AP4-201ENST00000427757 463 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 DPPA2P1-201ENST00000428060 556 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL7P59-201ENST00000447700 943 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC125238.1-201ENST00000448842 249 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 XKRYP5-201ENST00000449659 483 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 NANOGP10-201ENST00000453325 895 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 ARPC3P2-201ENST00000457786 533 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 RPS23P1-201ENST00000491662 432 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL31P61-201ENST00000496160 376 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC093325.1-201ENST00000508378 326 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 RNA5SP385-201ENST00000515947 110 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 RN7SKP83-201ENST00000516512 178 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 RNA5SP43-201ENST00000516559 110 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 IGHVII-44-2-201ENST00000517728 250 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 NDUFB9P3-201ENST00000521269 501 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC009643.1-201ENST00000532030 391 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC063949.1-201ENST00000552900 865 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 OR4H12P-201ENST00000556269 907 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC027176.2-201ENST00000559166 746 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC004832.5-201ENST00000608677 401 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AC090425.2-201ENST00000608818 501 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AL773545.4-201ENST00000637262 310 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AL513478.4-201ENST00000641636 310 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 OR6C71P-202ENST00000641886 1107 ntBASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CHKB-CPT1BH3BT56 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AL118496.1-201ENST00000440201 1812 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 RNA5SP295-201ENST00000362655 121 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 SNORA73.2-201ENST00000364946 201 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 RNU6-805P-201ENST00000365643 106 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR138-2-201ENST00000384916 84 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR301B-201ENST00000390813 78 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 SNORD66.1-201ENST00000391230 76 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR1251-201ENST00000408552 70 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 EEF1B2P8-201ENST00000414101 671 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 GTF2IP5-201ENST00000414608 731 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC114814.2-201ENST00000419195 485 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL31P45-201ENST00000419532 356 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 DNAJA1P1-201ENST00000425106 1187 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 PA2G4P1-201ENST00000442248 1197 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms