Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP175-201ENST00000364275 119 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP515-201ENST00000364570 118 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP151-201ENST00000365632 117 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL161909.1-201ENST00000397390 712 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 RPL6P29-201ENST00000414863 865 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 MTND2P21-201ENST00000436242 1042 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL353898.1-201ENST00000444055 238 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 RPS20P4-201ENST00000461659 355 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 RPL5P13-201ENST00000462840 709 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC107015.1-201ENST00000466902 747 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC108751.2-201ENST00000469993 231 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC037198.2-201ENST00000478845 733 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC026402.1-201ENST00000513642 170 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP49-201ENST00000516450 115 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 MIR2116-201ENST00000517221 80 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 MTCYBP19-201ENST00000517463 1124 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 HMGB1P46-201ENST00000520062 610 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC087888.1-201ENST00000550884 1254 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC068020.1-201ENST00000594215 661 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 IMMP1LP1-201ENST00000605170 488 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL591034.3-201ENST00000605511 685 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 Z98200.1-201ENST00000607298 470 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AP002360.3-201ENST00000607673 710 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL135786.2-201ENST00000608422 615 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL021997.2-201ENST00000615674 271 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AL356274.1-201ENST00000617064 410 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC131238.1-201ENST00000617135 328 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 FP325313.1-201ENST00000638228 703 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 OR5AC4P-202ENST00000642086 985 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 AC110792.3-201ENST00000595906 1614 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 MAPK10-320ENST00000641462 6696 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 VPS35P1-201ENST00000563400 1518 ntBASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.46□□□□□ -1.7
NEDD8-MDP1E9PL57 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 LARP1BP1-201ENST00000506036 1359 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 Y_RNA.126-201ENST00000363382 111 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 SNORD115-48-201ENST00000364764 76 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC104297.1-201ENST00000393779 870 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AL356057.1-202ENST00000402263 756 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP36-201ENST00000410197 133 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AL590806.1-201ENST00000415818 853 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC092691.2-201ENST00000461787 803 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 RN7SL691P-201ENST00000494487 301 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC010374.1-201ENST00000503762 1237 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC113430.1-201ENST00000506872 718 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 RNA5SP519-201ENST00000516480 119 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 RNU6-467P-201ENST00000517027 110 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC034236.3-201ENST00000605999 461 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AL450270.1-201ENST00000606160 391 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC00901.1-201ENST00000617252 152 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC007546.2-201ENST00000623996 360 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC106730.3-201ENST00000624568 641 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 HSPD1P14-201ENST00000432666 1618 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 SCN1A-220ENST00000641603 12506 ntBASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.45□□□□□ -1.7
NEDD8-MDP1E9PL57 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEDD8-MDP1E9PL57 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms