Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL354696.1-201ENST00000614652 497 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC026368.1-201ENST00000614934 690 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AL035461.2-201ENST00000619201 524 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 MIR7703-201ENST00000620784 77 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC012020.1-201ENST00000624541 1728 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC093535.2-201ENST00000624769 2326 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 CUL4AP1-201ENST00000514750 1863 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 RNU1-89P-201ENST00000384592 164 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 RNU6-1263P-201ENST00000384601 106 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 MTND4LP21-201ENST00000415303 295 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 RPL26P29-201ENST00000415623 438 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AL590139.1-201ENST00000416267 400 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AL358472.1-201ENST00000431295 329 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 Z85994.2-201ENST00000434327 452 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 RPS3AP54-201ENST00000435535 734 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 HMGB1P16-201ENST00000447155 540 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AL513343.1-201ENST00000451818 792 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 OR52A4P-202ENST00000481634 799 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 RPL23AP72-201ENST00000492447 435 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 RPL29P14-201ENST00000495837 428 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC111000.3-201ENST00000508057 576 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC008958.1-201ENST00000511047 682 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC010342.1-201ENST00000514047 877 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 ACTR6P1-201ENST00000514311 1104 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 RNA5SP228-201ENST00000516232 133 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC022968.1-201ENST00000567372 442 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC003001.2-201ENST00000616294 831 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AL139254.3-201ENST00000641097 674 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC116667.1-201ENST00000604855 2072 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 AC015813.6-201ENST00000624409 5808 ntBASIC4.07□□□□□ -1.76
TRIM49D1C9J1S8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 DDX18P3-201ENST00000404856 2007 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AL450326.2-201ENST00000421913 1962 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 RNA5SP322-201ENST00000363617 119 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 USP12PY-201ENST00000427677 1064 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 MTND6P18-201ENST00000439477 513 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 TPRKBP1-201ENST00000456243 481 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 RPS29P33-201ENST00000456717 146 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 AK3P4-201ENST00000504283 583 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 RNU4-18P-201ENST00000516751 149 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 RN7SKP92-201ENST00000517266 244 ntBASIC4.06□□□□□ -1.76
TRIM49D1C9J1S8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms