Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 CR383656.6-201ENST00000550518 394 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 MIR5096-201ENST00000583713 70 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 MIR486-1-201ENST00000612171 68 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC007546.1-201ENST00000619452 559 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC008785.1-201ENST00000624475 456 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 MTND4P10-201ENST00000446199 1363 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 EIF2AP4-201ENST00000424793 1781 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AL592437.2-201ENST00000421655 2434 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 MIR1179-201ENST00000408703 91 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 RHEBP3-201ENST00000411920 351 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC016769.2-201ENST00000414815 475 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 RPL12P34-201ENST00000424532 479 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 DNAJC19P7-201ENST00000428811 344 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AL356535.1-201ENST00000440335 398 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 RPS29P33-201ENST00000456717 146 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 RPL7P22-201ENST00000466005 733 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC096741.1-201ENST00000472250 846 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 IGHV3-32-201ENST00000519182 355 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC006064.5-201ENST00000541782 248 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 MTND2P17-201ENST00000550281 688 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC007424.1-203ENST00000554613 687 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AL109766.1-201ENST00000555080 552 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AL121839.1-201ENST00000556233 1185 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AL139041.1-201ENST00000605480 610 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC012603.1-201ENST00000606424 528 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC015922.4-201ENST00000612568 690 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AC114546.3-201ENST00000623582 1734 ntBASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DRB4X5D2U9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC010132.2-201ENST00000295493 1043 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 IGKV7-3-201ENST00000357453 298 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 MIR423-201ENST00000362201 94 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 SNORD66.1-201ENST00000391230 76 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AL589994.1-201ENST00000404962 340 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 MIR1183-201ENST00000408856 89 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 RPL26P29-201ENST00000415623 438 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC068287.1-201ENST00000430283 295 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 RPL23AP52-201ENST00000439311 478 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 TPTE2P3-201ENST00000441562 1189 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AL645939.1-201ENST00000453429 797 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms