Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 HMGB3P19-201ENST00000403971 560 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 LINC01881-201ENST00000416103 412 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 SEPT14P1-201ENST00000458703 648 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 RPL29P14-201ENST00000495837 428 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 AC017037.1-201ENST00000508460 471 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 AC104662.1-201ENST00000604448 511 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 RNU4-89P-201ENST00000607443 133 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 AC000123.3-201ENST00000624029 4975 ntBASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 SPRR2C-201ENST00000290702 219 ntBASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 CYP4F29P-201ENST00000420685 446 ntBASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 SEPT7P3-201ENST00000455017 621 ntBASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 TRBV8-1-201ENST00000481590 279 ntBASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 RN7SL271P-201ENST00000487601 295 ntBASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 TPT1P3-201ENST00000492841 512 ntBASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 SNORA35B-201ENST00000607417 129 ntBASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPC1L1Q9UHC9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 MARK2P15-201ENST00000432204 2186 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 CR382285.2-201ENST00000624662 1495 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 SAMMSON-213ENST00000641336 1521 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 RNA5SP52-201ENST00000362448 134 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AL121834.1-202ENST00000404494 277 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 RNU2-22P-201ENST00000411266 212 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AC002524.1-201ENST00000411687 547 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 CYP1D1P-201ENST00000416662 1433 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 FTLP19-201ENST00000433300 394 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AP002812.1-201ENST00000495378 474 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AP001960.1-201ENST00000506494 658 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 SNORA67.7-201ENST00000516664 135 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 MTND2P17-201ENST00000550281 688 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 LINC01109-201ENST00000603837 3081 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AC099676.1-201ENST00000608886 657 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 AC006133.1-201ENST00000617106 264 ntBASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
NPC1L1Q9UHC9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 RAB9AP4-201ENST00000415230 609 ntBASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 AL034379.1-201ENST00000423216 253 ntBASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 snoU13.22-201ENST00000459428 104 ntBASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 MTCO1P49-201ENST00000523429 802 ntBASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.51□□□□□ -1.53
NPC1L1Q9UHC9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms