Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 RNU1-94P-201ENST00000362627 173 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC062016.2-201ENST00000420950 676 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AL132765.1-201ENST00000434165 553 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC105918.1-201ENST00000474399 838 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC010374.1-201ENST00000503762 1237 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC008958.1-201ENST00000511047 682 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 OR5BC1P-201ENST00000529327 739 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC084824.1-201ENST00000550917 1005 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 VN1R85P-201ENST00000601587 426 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AL591034.3-201ENST00000605511 685 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AP002360.3-201ENST00000607673 710 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 MIR6715B-201ENST00000637172 77 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
APOBEC3BQ9UH17 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 MAPK10-303ENST00000641324 3959 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 NRBF2P2-201ENST00000413087 861 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 MFSD13B-201ENST00000420133 1290 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 MTCO1P57-201ENST00000432182 261 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 IFNWP4-201ENST00000453148 294 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 DDX39BP2-208ENST00000453923 258 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 ATP5G1P3-201ENST00000463301 410 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 RPS7P7-201ENST00000463499 571 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 RPL7AP28-201ENST00000464513 571 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 PPM1AP1-201ENST00000502740 1135 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 SEC11B-201ENST00000518383 499 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 HNRNPCP4-201ENST00000571636 900 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC024941.1-201ENST00000612250 334 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 MIR8059-201ENST00000620427 81 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AC090506.2-201ENST00000624521 419 ntBASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC3BQ9UH17 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 AP001002.1-201ENST00000625148 1513 ntBASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 AC087565.3-202ENST00000642085 1603 ntBASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 RNA5SP175-201ENST00000364275 119 ntBASIC4.26□□□□□ -1.73
APOBEC3BQ9UH17 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms