Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR19A-201ENST00000384878 82 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 U3.20-201ENST00000390909 217 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 H2AFZP3-201ENST00000394213 387 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL512633.1-201ENST00000399931 655 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CNN2P7-201ENST00000400583 932 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL031679.1-201ENST00000400616 525 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 VAMP8-202ENST00000409760 805 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SKP139-201ENST00000410411 293 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP127-201ENST00000411051 133 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP111-201ENST00000411386 101 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 PPIAP29-201ENST00000414949 499 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ELOBP3-201ENST00000416023 294 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01238-201ENST00000416204 590 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CYP4F62P-201ENST00000417310 524 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL157401.1-201ENST00000419836 344 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 PPIAP25-201ENST00000420177 540 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL117328.1-201ENST00000422315 162 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL591419.1-201ENST00000427423 339 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01716-202ENST00000437350 298 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC108734.1-201ENST00000439549 399 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC073188.1-201ENST00000442493 361 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC010904.1-201ENST00000443549 315 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RPS7P4-201ENST00000444127 582 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 C20orf173-204ENST00000444723 1059 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 GFOD1-AS1-201ENST00000446001 332 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL358232.1-201ENST00000448030 501 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC092421.1-201ENST00000448148 418 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC006455.3-201ENST00000454641 333 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC026410.2-201ENST00000460281 156 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC146507.2-201ENST00000460608 476 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL380P-201ENST00000461702 308 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL049747.1-201ENST00000472240 852 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC108114.1-201ENST00000477321 437 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02004-201ENST00000482019 294 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 NME9-208ENST00000484930 825 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 GUSBP2-203ENST00000492832 801 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC245052.6-201ENST00000506567 219 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC091839.1-201ENST00000513087 269 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORA18.4-201ENST00000516440 124 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP40-201ENST00000517147 110 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC134698.2-201ENST00000519172 311 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 OR2AT1P-201ENST00000525935 743 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 PRSS2-201ENST00000539842 795 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AP003721.3-201ENST00000543275 405 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM181A-AS1-204ENST00000556290 526 ntTSL 4 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 EARS2-207ENST00000563459 3840 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC010650.1-201ENST00000567559 494 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC120045.1-202ENST00000567770 1068 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL525P-201ENST00000579267 280 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC119868.1-201ENST00000579307 336 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 PROCA1-209ENST00000581289 766 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC060771.1-201ENST00000582031 164 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC106037.1-201ENST00000584148 336 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 BRCA1-227ENST00000591849 563 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC012313.7-201ENST00000598051 409 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL356575.1-201ENST00000603008 283 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC016727.1-201ENST00000603652 545 ntTSL 4 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC008626.1-201ENST00000604384 255 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 Metazoa_SRP.204-201ENST00000611908 247 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL428P-201ENST00000613848 247 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SMIM2-202ENST00000617002 255 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL331P-201ENST00000618054 247 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 Metazoa_SRP.184-201ENST00000619339 258 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 WT1-AS_1.1-201ENST00000619639 109 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC000123.2-201ENST00000623124 461 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC006435.5-201ENST00000624486 112 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC096920.2-201ENST00000624711 339 ntTSL 4 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CBR3-AS1-218ENST00000625189 517 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CFAP45-202ENST00000426543 1976 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 TNPO1P3-201ENST00000436471 2662 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CAB39L-201ENST00000347776 3361 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC009779.3-202ENST00000550412 3382 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ZSCAN20-201ENST00000361328 4316 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 PSMD1-203ENST00000409643 2901 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 ANKRD6-213ENST00000520793 2489 ntTSL 2 BASIC1.84□□□□□ -2.12
KRTAP4-4Q9BYR3 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms