Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 VPS35P1-201ENST00000563400 1518 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 NMNAT1P2-201ENST00000435192 860 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 RPL7P1-201ENST00000468161 747 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 HMGB3P16-201ENST00000508037 287 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 EIF5A2P1-201ENST00000564027 460 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC139426.3-201ENST00000605648 2059 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 UBA52P6-201ENST00000399822 382 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AL078604.1-201ENST00000404609 466 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 RNA5SP306-201ENST00000411087 107 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 DPY19L1P2-201ENST00000426647 915 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 EIF4A1P11-201ENST00000451239 222 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC108751.2-201ENST00000469993 231 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC080014.1-201ENST00000496877 1201 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 IGKV2-38-201ENST00000517443 247 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC104763.2-201ENST00000604179 382 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 Y_RNA.238-201ENST00000364441 102 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 HMGB3P19-201ENST00000403971 560 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC097713.2-201ENST00000430199 356 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 HMGB3P9-201ENST00000441799 583 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 RPL26P28-201ENST00000451325 435 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC010342.1-201ENST00000514047 877 ntBASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSMD1Q96PZ7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 RPL38P1-201ENST00000460914 211 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 NPM1P47-201ENST00000560843 856 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AC079684.1-201ENST00000621405 437 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 SOD2P1-201ENST00000396543 562 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 RPL5P18-201ENST00000406671 891 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 RPS29P4-201ENST00000414733 161 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 OR2AH1P-201ENST00000425717 928 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AC125494.3-201ENST00000602759 455 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AL355596.1-201ENST00000565399 3996 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms