Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HMGB1P21-201ENST00000502313 581 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC007016.1-201ENST00000512110 244 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC044860.2-201ENST00000561005 179 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC027104.1-201ENST00000563702 681 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 UBE2FP2-201ENST00000566646 462 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC091042.1-201ENST00000579213 173 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC090312.2-201ENST00000582687 378 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC091178.1-203ENST00000584586 279 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC079880.2-201ENST00000603790 1213 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC098935.2-201ENST00000604222 466 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AL512506.1-201ENST00000613918 449 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC023509.5-201ENST00000617434 807 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 MIR6719-201ENST00000622428 87 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 U3.53-201ENST00000628922 216 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AC090229.1-201ENST00000590983 1609 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 AL391684.1-202ENST00000641293 1636 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 ZNF137P-201ENST00000456718 1920 ntBASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM5Q96HC4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 RNU1-20P-201ENST00000363314 162 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 RNA5SP151-201ENST00000365632 117 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 RNA5SP87-201ENST00000384155 118 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 MTATP6P31-201ENST00000406985 692 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 ATG4AP1-201ENST00000416893 538 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 ELOCP3-201ENST00000439303 348 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 RPS3AP53-201ENST00000454716 778 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC091685.2-201ENST00000454924 864 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC005008.1-201ENST00000456151 612 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC018638.3-201ENST00000461273 132 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC104763.1-201ENST00000475274 360 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC106806.2-201ENST00000509365 500 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 NDUFB4P12-201ENST00000513465 390 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC134698.5-201ENST00000519444 336 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC090151.1-201ENST00000520784 730 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 BRD9P1-201ENST00000529855 560 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 MIR3934-201ENST00000579806 107 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC125494.3-201ENST00000602759 455 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC073091.2-201ENST00000603205 907 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC005034.4-201ENST00000603612 899 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC024933.1-201ENST00000608472 348 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AP000240.1-201ENST00000609910 452 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 AC090510.2-201ENST00000617465 629 ntBASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PDLIM5Q96HC4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.5□□□□□ -1.69
PDLIM5Q96HC4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDLIM5Q96HC4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
PDLIM5Q96HC4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM5Q96HC4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms