Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC010306.1-201ENST00000523223 1117 ntBASIC4.2□□□□□ -1.74
RFT1Q96AA3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 OR7E128P-201ENST00000532736 1024 ntBASIC4.2□□□□□ -1.74
RFT1Q96AA3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 AC004825.1-201ENST00000555068 586 ntBASIC4.2□□□□□ -1.74
RFT1Q96AA3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 MTND6P33-201ENST00000571794 183 ntBASIC4.2□□□□□ -1.74
RFT1Q96AA3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 RN7SL622P-201ENST00000585292 275 ntBASIC4.2□□□□□ -1.74
RFT1Q96AA3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 EIF1P6-201ENST00000600054 334 ntBASIC4.2□□□□□ -1.74
RFT1Q96AA3 NTAN1P1-201ENST00000603150 646 ntBASIC4.2□□□□□ -1.74
RFT1Q96AA3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 AC078899.5-201ENST00000612475 178 ntBASIC4.2□□□□□ -1.74
RFT1Q96AA3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 AL138960.2-201ENST00000625145 535 ntBASIC4.2□□□□□ -1.74
RFT1Q96AA3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFT1Q96AA3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFT1Q96AA3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.2□□□□□ -1.74
RFT1Q96AA3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 Z98755.1-201ENST00000407015 1384 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 RNU2-65P-201ENST00000410162 185 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 DDX39BP1-205ENST00000422507 192 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 OR5AW1P-201ENST00000426334 1006 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC009263.1-201ENST00000441193 1239 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 RPS7P5-201ENST00000441482 581 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL137845.2-201ENST00000444292 988 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC044797.1-201ENST00000445744 679 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL389915.2-201ENST00000454576 441 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 SCARNA10-201ENST00000459255 330 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 ATP5G1P3-201ENST00000463301 410 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC097484.1-201ENST00000471148 389 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 RN7SL244P-201ENST00000493405 297 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC135001.1-201ENST00000544546 283 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL121834.1-201ENST00000572284 509 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AP003117.1-201ENST00000602771 554 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC093765.1-201ENST00000603758 881 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL627230.1-201ENST00000613077 211 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL121873.1-201ENST00000616013 524 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL591926.8-201ENST00000616876 211 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC078880.5-201ENST00000617845 421 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL035461.2-201ENST00000619201 524 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 AL022401.1-201ENST00000619498 108 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 MIR7154-201ENST00000620673 73 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 AC007390.2-201ENST00000606229 3803 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.19□□□□□ -1.74
RFT1Q96AA3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFT1Q96AA3 ZNF849P-201ENST00000594711 1566 ntBASIC4.19□□□□□ -1.74
RFT1Q96AA3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.18□□□□□ -1.74
RFT1Q96AA3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RFT1Q96AA3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RFT1Q96AA3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RFT1Q96AA3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.18□□□□□ -1.74
RFT1Q96AA3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RFT1Q96AA3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms