Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC095055.1-201ENST00000603472 1113 ntBASIC5.62□□□□□ -1.51
HPS3Q969F9 DPRXP5-201ENST00000604662 539 ntBASIC5.62□□□□□ -1.51
HPS3Q969F9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.62□□□□□ -1.51
HPS3Q969F9 MIR6798-201ENST00000612887 67 ntBASIC5.62□□□□□ -1.51
HPS3Q969F9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.62□□□□□ -1.51
HPS3Q969F9 AC022509.4-201ENST00000621404 572 ntBASIC5.62□□□□□ -1.51
HPS3Q969F9 AC078883.4-201ENST00000623218 367 ntBASIC5.62□□□□□ -1.51
HPS3Q969F9 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.62□□□□□ -1.51
HPS3Q969F9 MIR1322-201ENST00000638013 71 ntBASIC5.62□□□□□ -1.51
HPS3Q969F9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HPS3Q969F9 AC073429.2-201ENST00000569694 1444 ntBASIC5.62□□□□□ -1.51
HPS3Q969F9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HPS3Q969F9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HPS3Q969F9 AL590763.1-201ENST00000398297 1545 ntBASIC5.62□□□□□ -1.51
HPS3Q969F9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HPS3Q969F9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HPS3Q969F9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HPS3Q969F9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HPS3Q969F9 AC008079.2-201ENST00000623543 20396 ntBASIC5.62□□□□□ -1.51
HPS3Q969F9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HPS3Q969F9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HPS3Q969F9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.61□□□□□ -1.51
HPS3Q969F9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HPS3Q969F9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.61□□□□□ -1.51
HPS3Q969F9 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HPS3Q969F9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HPS3Q969F9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HPS3Q969F9 RNU1-106P-201ENST00000384382 164 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AC093719.1-202ENST00000392735 373 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 SNORA77-201ENST00000408716 125 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HPS3Q969F9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.61□□□□□ -1.51
HPS3Q969F9 AC211486.3-201ENST00000412694 621 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.61□□□□□ -1.51
HPS3Q969F9 OR51A3P-201ENST00000413596 924 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.61□□□□□ -1.51
HPS3Q969F9 AC104454.1-201ENST00000421341 1401 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HPS3Q969F9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.61□□□□□ -1.51
HPS3Q969F9 GTF2IP7-202ENST00000436677 309 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 TCEA1P3-201ENST00000443005 880 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.61□□□□□ -1.51
HPS3Q969F9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.61□□□□□ -1.51
HPS3Q969F9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.61□□□□□ -1.51
HPS3Q969F9 AL355852.1-201ENST00000454081 1771 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.61□□□□□ -1.51
HPS3Q969F9 AC091180.1-201ENST00000462104 372 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AC005532.2-201ENST00000467154 373 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 RPL32P9-201ENST00000487963 407 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 RN7SL30P-201ENST00000488416 306 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AC006499.3-201ENST00000506077 748 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.61□□□□□ -1.51
HPS3Q969F9 FABP5P12-201ENST00000515543 389 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AC012339.2-201ENST00000523996 453 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.61□□□□□ -1.51
HPS3Q969F9 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.61□□□□□ -1.51
HPS3Q969F9 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.61□□□□□ -1.51
HPS3Q969F9 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.61□□□□□ -1.51
HPS3Q969F9 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.61□□□□□ -1.51
HPS3Q969F9 AL354943.1-201ENST00000572103 781 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.61□□□□□ -1.51
HPS3Q969F9 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.61□□□□□ -1.51
HPS3Q969F9 AC011453.2-201ENST00000603737 729 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AL627230.1-201ENST00000613077 211 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 AL591926.8-201ENST00000616876 211 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HPS3Q969F9 AC099494.2-201ENST00000623371 978 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.61□□□□□ -1.51
HPS3Q969F9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.61□□□□□ -1.51
HPS3Q969F9 CASC19-221ENST00000641309 1382 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 CASC19-222ENST00000641321 1173 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 ASNSP1-204ENST00000641977 1664 ntBASIC5.61□□□□□ -1.51
HPS3Q969F9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HPS3Q969F9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HPS3Q969F9 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 AC100778.3-201ENST00000580060 1750 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC104260.2-201ENST00000623551 3497 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HPS3Q969F9 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC104623.2-202ENST00000623477 4002 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC022031.1-201ENST00000585985 2593 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HPS3Q969F9 MIR223-201ENST00000385204 110 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HPS3Q969F9 GSTA8P-201ENST00000404253 637 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.6□□□□□ -1.51
HPS3Q969F9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.6□□□□□ -1.51
HPS3Q969F9 AC007394.1-201ENST00000421941 531 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 DPRXP1-201ENST00000426312 460 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC005033.1-201ENST00000428904 813 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.6□□□□□ -1.51
HPS3Q969F9 COX7BP2-201ENST00000437976 242 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 TXNP5-201ENST00000441043 315 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.6□□□□□ -1.51
HPS3Q969F9 TCEA1P1-201ENST00000449716 880 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AC243772.1-201ENST00000451620 410 ntBASIC5.6□□□□□ -1.51
HPS3Q969F9 AL691482.1-201ENST00000453255 87 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms