Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-CQ95604 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-CQ95604 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-CQ95604 AC093267.1-201ENST00000489176 961 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 RN7SKP24-201ENST00000515888 284 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-CQ95604 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 AP005435.4-201ENST00000529514 284 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-CQ95604 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-CQ95604 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-CQ95604 OR4K8P-201ENST00000578842 1048 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 MIR3942-201ENST00000585264 109 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-CQ95604 AC091133.5-201ENST00000603088 301 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-CQ95604 AC100812.1-201ENST00000607622 580 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 AC022893.3-201ENST00000607665 437 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-CQ95604 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
HLA-CQ95604 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-CQ95604 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HLA-CQ95604 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-CQ95604 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-CQ95604 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HLA-CQ95604 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 SMG1P5-202ENST00000529428 4219 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 SMG1P2-201ENST00000566127 4221 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
HLA-CQ95604 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HLA-CQ95604 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.16□□□□□ -1.26
HLA-CQ95604 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 COX6B1P3-201ENST00000312310 260 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HLA-CQ95604 Y_RNA.5-201ENST00000362334 102 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 RNU6-379P-201ENST00000363813 104 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 RNU6-1040P-201ENST00000383974 107 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 Y_RNA.574-201ENST00000384766 95 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 RNA5SP474-201ENST00000391234 90 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-CQ95604 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.16□□□□□ -1.26
HLA-CQ95604 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-CQ95604 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-CQ95604 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-CQ95604 PRPF38AP2-201ENST00000438179 851 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 RPS24P13-201ENST00000442520 397 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-CQ95604 PRPS1P1-201ENST00000445305 876 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 UBBP5-201ENST00000446970 266 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-CQ95604 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 RPL30P15-201ENST00000457129 321 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 AC002075.1-201ENST00000457396 676 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 UBFD1P1-201ENST00000473259 814 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 AP000893.1-201ENST00000474462 794 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 AC124945.1-201ENST00000485133 188 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 RNU6-1088P-201ENST00000516850 104 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 RN7SKP99-201ENST00000517028 307 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 AP003497.1-201ENST00000528472 562 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 AC027544.3-201ENST00000535082 757 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-CQ95604 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HLA-CQ95604 MIR4790-201ENST00000577799 79 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC7.16□□□□□ -1.26
HLA-CQ95604 GLUD1P2-201ENST00000583339 201 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 GLUD1P8-201ENST00000585063 203 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC7.16□□□□□ -1.26
HLA-CQ95604 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-CQ95604 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.16□□□□□ -1.26
HLA-CQ95604 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-CQ95604 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-CQ95604 AC113194.1-201ENST00000606037 500 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 OR6R2P-201ENST00000609216 300 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-CQ95604 AC012213.2-201ENST00000562917 4597 ntBASIC7.16□□□□□ -1.26
HLA-CQ95604 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-CQ95604 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-CQ95604 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HLA-CQ95604 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms