Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 RNA5SP108-201ENST00000605921 117 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 VN1R9P-201ENST00000614184 867 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC022079.2-201ENST00000619739 566 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC025031.4-201ENST00000621248 3271 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.38□□□□□ -1.71
PTP4A1Q93096 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 AC107068.1-201ENST00000563286 4218 ntBASIC4.38□□□□□ -1.71
PTP4A1Q93096 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTP4A1Q93096 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 NMD3P1-201ENST00000439704 1488 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL672167.1-203ENST00000641299 2975 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 RNU6-1293P-201ENST00000384077 107 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 U3.35-201ENST00000408405 208 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 RNA5SP345-201ENST00000410646 108 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC007394.1-201ENST00000421941 531 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 EIF4EP1-201ENST00000422311 642 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 TDGF1P1-201ENST00000445734 527 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC000111.2-201ENST00000448200 210 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 OTX2P1-201ENST00000450956 354 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 SCARNA10-201ENST00000459255 330 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC006499.3-201ENST00000506077 748 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 RNA5SP43-201ENST00000516559 110 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 SCARNA21.2-201ENST00000516600 166 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 MYL12AP1-201ENST00000518490 515 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC005377.1-201ENST00000605126 456 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC113194.1-201ENST00000606037 500 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC005972.3-201ENST00000606304 481 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL512624.1-201ENST00000613638 469 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL512506.1-201ENST00000613918 449 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL353726.1-201ENST00000614041 1000 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL121873.1-201ENST00000616013 524 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 RNU6-156P-201ENST00000621869 107 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC004943.3-201ENST00000624116 600 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AL359922.3-201ENST00000624779 1670 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTP4A1Q93096 AC008758.3-201ENST00000507003 1829 ntBASIC4.37□□□□□ -1.71
PTP4A1Q93096 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.37□□□□□ -1.71
PTP4A1Q93096 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 Y_RNA.110-201ENST00000363220 99 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 Z97832.1-201ENST00000402490 328 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTP4A1Q93096 RNU4-34P-201ENST00000410431 124 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 FABP7P1-201ENST00000424004 391 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AC234779.1-201ENST00000425910 285 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.36□□□□□ -1.71
PTP4A1Q93096 YWHAEP5-201ENST00000431545 765 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 RPS27P18-201ENST00000431701 247 ntBASIC4.36□□□□□ -1.71
PTP4A1Q93096 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms