Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MRPS36P3-201ENST00000519284 130 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 DUXAP5-201ENST00000529668 529 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC092747.2-201ENST00000545069 983 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AL390334.1-201ENST00000556395 450 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC090888.2-201ENST00000559765 1144 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC022884.2-201ENST00000578535 580 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC123786.2-201ENST00000603459 275 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC025588.2-201ENST00000604851 466 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AL355493.4-201ENST00000618530 292 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 CASC19-206ENST00000641028 1430 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 AL445437.1-201ENST00000623157 3087 ntBASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC33Q8N5R6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC107027.3-201ENST00000565095 3473 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 CASC19-204ENST00000641001 2055 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC092162.3-201ENST00000624511 1624 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 snoZ40.1-201ENST00000364540 72 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 RNU6-619P-201ENST00000365146 108 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 RNA5SP223-201ENST00000365174 120 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 ERHP2-201ENST00000402323 299 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 OR51A3P-201ENST00000413596 924 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC234782.4-201ENST00000417646 1048 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 ELOCP9-201ENST00000418624 239 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC005005.2-201ENST00000420779 380 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 NPM1P24-201ENST00000428039 894 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AL360081.1-201ENST00000428299 555 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 RPL12P28-201ENST00000430852 489 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 CETN4P-201ENST00000432407 469 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC092013.1-201ENST00000438795 332 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC099063.2-201ENST00000446360 662 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 MTND1P31-201ENST00000449206 961 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 RHEBP2-201ENST00000450289 600 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 RPS27P23-201ENST00000487608 251 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC022133.1-201ENST00000490961 571 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC090695.1-201ENST00000561269 1222 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC087283.1-201ENST00000604029 1074 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AL355816.1-201ENST00000607951 118 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AP004247.3-201ENST00000608682 624 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC021755.4-201ENST00000616620 456 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 AC091905.4-201ENST00000623432 202 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 CR392039.4-201ENST00000624968 501 ntBASIC5.35□□□□□ -1.55
CCDC33Q8N5R6 OR2L1P-202ENST00000641567 1023 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms