Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 SNORA66-201ENST00000384792 133 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL034374.1-201ENST00000406329 351 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 RNA5SP146-201ENST00000410743 123 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 HMGB3P31-201ENST00000413333 595 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL356320.2-201ENST00000417263 507 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 LINC01347-201ENST00000417964 355 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 BX119904.4-201ENST00000424402 301 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 MTND4P32-201ENST00000437189 1237 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC068135.1-201ENST00000446164 246 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 OTX2P1-201ENST00000450956 354 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 GYG1P1-201ENST00000460864 698 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC108751.2-201ENST00000469993 231 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 RPS18P6-201ENST00000476880 458 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC079841.1-201ENST00000481228 950 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 DEFB109F-201ENST00000491870 277 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 ENPP7P9-201ENST00000514456 627 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 MIR3176-201ENST00000582210 90 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 PIGPP4-201ENST00000584447 307 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC015726.1-201ENST00000602353 681 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL109653.1-201ENST00000603091 248 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL358072.1-201ENST00000604156 575 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 TAS2R6P-201ENST00000605022 826 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC013468.1-201ENST00000608680 598 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC009237.15-201ENST00000610252 501 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC096586.1-201ENST00000610267 561 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC011815.3-201ENST00000624194 473 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL592182.3-201ENST00000642132 3304 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 ECM1P2-201ENST00000503354 1577 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 TLK1P1-201ENST00000456760 2440 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 SCN1A-220ENST00000641603 12506 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 SNURFL-201ENST00000309296 343 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 RNU6-171P-201ENST00000384354 107 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 MTCO1P56-201ENST00000401674 224 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 SFR1P1-201ENST00000403720 688 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL136131.1-201ENST00000406079 803 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 U3.36-201ENST00000408418 213 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 HIGD1AP12-201ENST00000427832 281 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 FABP7P2-201ENST00000429946 379 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 RHOT1P3-201ENST00000436571 331 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL592437.1-201ENST00000443781 492 ntBASIC4.56□□□□□ -1.68
CLIP4Q8N3C7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms