Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SNORD116-26-201ENST00000516006 96 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 RNU6-941P-201ENST00000516346 108 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 COX6B1P6-201ENST00000522347 255 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 TRIM77BP-201ENST00000524985 1119 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 AC023825.1-201ENST00000566704 1030 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 MIR4716-201ENST00000579628 84 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 MIR4644-201ENST00000579929 84 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 AC090312.1-201ENST00000580637 348 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 MIR4505-201ENST00000582238 73 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 AC008758.3-201ENST00000507003 1829 ntBASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CROCCP3Q8IVE0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC103591.2-201ENST00000265259 766 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC023490.2-201ENST00000359859 470 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 RNA5SP322-201ENST00000363617 119 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 SNORA67-201ENST00000384423 137 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 RNU1-89P-201ENST00000384592 164 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AL035419.1-201ENST00000397037 564 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 RN7SKP114-201ENST00000410327 279 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 RNA5SP306-201ENST00000411087 107 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC069282.1-201ENST00000411911 526 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC093698.1-201ENST00000423843 571 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 RPS6P12-201ENST00000432491 726 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 OR7E125P-201ENST00000443450 846 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 KNOP1P3-201ENST00000446933 426 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 EEF1B2P3-201ENST00000447718 678 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AL050341.1-201ENST00000447743 313 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC104689.1-201ENST00000473356 768 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 RPS4XP6-201ENST00000477670 797 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC010350.1-201ENST00000504908 231 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 HMGB1P23-201ENST00000518743 568 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC091515.1-201ENST00000548110 679 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 NMNAT1P1-201ENST00000554095 876 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 MIR4789-201ENST00000577469 82 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 MIR1273E-201ENST00000581165 102 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC008507.2-201ENST00000588402 1176 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC244505.7-201ENST00000599675 272 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC069307.1-201ENST00000602820 447 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 ASNSP1-204ENST00000641977 1664 ntBASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CROCCP3Q8IVE0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CROCCP3Q8IVE0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.21□□□□□ -1.73
CROCCP3Q8IVE0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CROCCP3Q8IVE0 ASNSP1-201ENST00000518311 1939 ntBASIC4.21□□□□□ -1.74
CROCCP3Q8IVE0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.21□□□□□ -1.74
CROCCP3Q8IVE0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.21□□□□□ -1.74
CROCCP3Q8IVE0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CROCCP3Q8IVE0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms