Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 FRG1HP-204ENST00000617940 757 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 CASC19-264ENST00000641912 1184 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 AP001029.2-203ENST00000589795 4910 ntBASIC5.19□□□□□ -1.58
VRK3Q8IV63 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.19□□□□□ -1.58
VRK3Q8IV63 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VRK3Q8IV63 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 CR848007.1-201ENST00000442354 1699 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 OR9G4-201ENST00000302957 984 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 RNU6-500P-201ENST00000362349 107 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 SNORA75-201ENST00000384158 137 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 RNA5SP241-201ENST00000391326 114 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AL139421.1-201ENST00000423010 169 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 RPL19P16-201ENST00000433839 588 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC241584.1-201ENST00000438469 1241 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 RPS20P4-201ENST00000461659 355 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 GAPDHP36-201ENST00000480688 918 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC138853.1-201ENST00000503549 823 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 HSPE1P23-201ENST00000509838 286 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 RNU6-678P-201ENST00000516832 109 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 snoZ278.1-201ENST00000517059 112 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 OR4R3P-201ENST00000525084 838 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 RPS3AP4-201ENST00000555161 764 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC079171.1-201ENST00000568788 914 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 MTND1P15-201ENST00000579262 949 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AP002884.5-201ENST00000595053 1132 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC069307.1-201ENST00000602820 447 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 U73023.1-201ENST00000603134 700 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC018714.1-201ENST00000605028 208 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC004067.1-201ENST00000608733 700 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC073569.3-201ENST00000619055 682 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC026523.2-201ENST00000625039 7739 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 AC011477.1-204ENST00000623416 1325 ntBASIC5.18□□□□□ -1.58
VRK3Q8IV63 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VRK3Q8IV63 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VRK3Q8IV63 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AL121657.1-201ENST00000327215 531 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 IL6STP1-201ENST00000346911 1020 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 RNU6-797P-201ENST00000363101 109 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC092642.1-201ENST00000392417 425 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 RPL23AP59-201ENST00000399415 461 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 RPL10P10-201ENST00000403509 664 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 RN7SKP33-201ENST00000410942 340 ntBASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.17□□□□□ -1.58
VRK3Q8IV63 TAF13P2-201ENST00000416876 286 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms