Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AL645927.1-201ENST00000396783 406 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AL731534.1-201ENST00000434711 269 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 RPL7L1P11-201ENST00000446092 721 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC012512.1-201ENST00000446594 718 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AZGP1P2-201ENST00000454506 345 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 MTCO3P2-201ENST00000457365 171 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 MTND5P22-201ENST00000458380 195 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 MTCO2P29-201ENST00000465212 189 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC090453.1-201ENST00000495560 436 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 GSTP1P1-201ENST00000548078 319 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 NCAPGP2-201ENST00000557911 754 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC245052.7-201ENST00000601161 359 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC004908.1-201ENST00000606572 541 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 AC012618.3-205ENST00000637896 1496 ntBASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRPF38BQ5VTL8 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 ASNSP3-201ENST00000451989 1306 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC235565.1-201ENST00000456962 1325 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 RNY4P16-201ENST00000364768 94 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 EIF5P1-201ENST00000400019 1231 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC244452.1-201ENST00000413798 141 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC008280.1-201ENST00000418851 412 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC234781.4-201ENST00000419384 244 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 DUTP4-201ENST00000424782 475 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 RPL12P3-201ENST00000440080 396 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 DDX3P2-201ENST00000446138 111 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 CFL1P4-201ENST00000451536 498 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 MTND3P16-201ENST00000452205 344 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AP1S2P1-201ENST00000457344 379 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC011005.3-201ENST00000491624 395 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC017037.1-201ENST00000508460 471 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC005741.1-201ENST00000511094 432 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 RNA5SP418-201ENST00000515951 117 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 Y_RNA.718-201ENST00000517110 102 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AP000435.1-201ENST00000528539 496 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AP002373.2-201ENST00000541631 1060 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 OR4T1P-201ENST00000554933 911 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AL356432.3-201ENST00000568952 465 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 LARP7P2-201ENST00000575306 125 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 XIAPP1-201ENST00000603162 600 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AL627309.6-201ENST00000606857 840 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AL022345.1-201ENST00000607292 135 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AL391813.2-201ENST00000609113 322 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC019193.3-201ENST00000609144 554 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 AC130324.3-201ENST00000614165 542 ntBASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRPF38BQ5VTL8 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms