Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC009229.4-201ENST00000623854 1947 ntBASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 RNA5SP97-201ENST00000365006 84 ntBASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 MIR128-1-201ENST00000384921 82 ntBASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 OR6C71P-201ENST00000432580 913 ntBASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 RPS26P2-201ENST00000440331 348 ntBASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 RN7SKP18-201ENST00000516005 275 ntBASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNAPC4Q5SXM2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 ATP5A1P2-201ENST00000412323 255 ntBASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 PRELID3BP6-201ENST00000503839 571 ntBASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNAPC4Q5SXM2 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 AL672167.1-203ENST00000641299 2975 ntBASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 CBX1P3-201ENST00000413296 527 ntBASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 AL391219.1-201ENST00000422570 483 ntBASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 RNU7-143P-201ENST00000516781 65 ntBASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 QTRT1P1-201ENST00000604344 1078 ntBASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 OR6C71P-202ENST00000641886 1107 ntBASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 NAMPTP1-201ENST00000440465 2514 ntBASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.5□□□□□ -1.37
SNAPC4Q5SXM2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 MIR1271-201ENST00000408537 86 ntBASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 VDAC1P9-201ENST00000412766 841 ntBASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 RPL5P24-201ENST00000463742 885 ntBASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 MIR5187-201ENST00000583479 76 ntBASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 AL513477.2-201ENST00000607858 568 ntBASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 AC019278.1-201ENST00000623516 479 ntBASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 AL513548.1-201ENST00000562904 1724 ntBASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 GVINP1-202ENST00000531871 7271 ntBASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 AL137918.1-201ENST00000624542 1922 ntBASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC6.49□□□□□ -1.37
SNAPC4Q5SXM2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 SNORA48.2-201ENST00000390926 124 ntBASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 AL161631.1-201ENST00000417933 486 ntBASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 AC236972.1-201ENST00000433225 199 ntBASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 Z74696.2-201ENST00000436514 498 ntBASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 RPL21P23-201ENST00000446654 460 ntBASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 OR5B10P-201ENST00000532869 642 ntBASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 AC103968.1-201ENST00000557841 573 ntBASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 SNX6P1-201ENST00000601728 1224 ntBASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.48□□□□□ -1.37
SNAPC4Q5SXM2 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms